Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0929 |
Symbol | |
ID | 4172136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1103486 |
End bp | 1104340 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638053930 |
Product | hypothetical protein |
Protein accession | YP_660509 |
Protein GI | 109897254 |
COG category | [S] Function unknown |
COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCCAAA CACTCATTTA TTGTTTACTC AGCCTGCCGA TAGTGATCAT GCTGGGCTGG TTTTATTTCG ACAAGCGCAA GCTAAAACGC AAAAAAGCAC GGCGCGCTGT ATTAAGTGCT AAACCGTTAG CACCTGAATA TCTGCAGATT TTAAAAAACC AATACCCATT GTATTCACGC CTGCCTAACG AACTGCAGCG TAAGCTCGTT GGCCACATGC AAGTGTTTTT AGATGAAAAA GACATCATTG GCCGAGGTGA ATTCGACGTC ACCGATACGG TGCGCGTGTT AATCGCTGCA CAAGCATGCA CCTTATTGCT CAATCGCCCG GGTGATTACT ACCCTGGTTT TCGGACGATT TTGGTTTACC CCGACACTTA TGTGGCTAGC AGCACCCAAC ATGATGGCTT GTTGCAGGTC ACGTCCACCA GCACTCGCGC GGGTGAGTCT TGGCATCGCG GGCCAATTGT TCTCGCTTGG GAGCACGTGC TACAAGGCGC CCTTGATAGC CGTGATGGGC ACAACGTAGT GATGCATGAA TTCGCCCACA AATTAGATGA AGAAAATGCC GCCATGGACG GCCTGCCATT ATTACCTACA GCCGAACAAT ACCAACAATG GTCACAGGTG TTAGGCGCTG AATTCGCCGT GCAACAACAA AAATTGGCCA ATGGCGATAA CGATGTGATC GACAGTTATG GCGCAACCTC CCCGGCCGAA TTTTTCGCTG TTGTGACAGA AACCTTCTTT GAAAAGCCGC ATCAACTGCA ACGCCACCAC CCGAAACTGT ATGAACAGTT CAAGCAGTGT TACCTGCTTA ACCCATTGGA GTGGCGGGAA TTGAAACAGT CGTAA
|
Protein sequence | MRQTLIYCLL SLPIVIMLGW FYFDKRKLKR KKARRAVLSA KPLAPEYLQI LKNQYPLYSR LPNELQRKLV GHMQVFLDEK DIIGRGEFDV TDTVRVLIAA QACTLLLNRP GDYYPGFRTI LVYPDTYVAS STQHDGLLQV TSTSTRAGES WHRGPIVLAW EHVLQGALDS RDGHNVVMHE FAHKLDEENA AMDGLPLLPT AEQYQQWSQV LGAEFAVQQQ KLANGDNDVI DSYGATSPAE FFAVVTETFF EKPHQLQRHH PKLYEQFKQC YLLNPLEWRE LKQS
|
| |