| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0901 |
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| Symbol | |
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| ID | 4172947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1073655 |
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| End bp | 1074395 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053902 |
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| Product | GntR-like |
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| Protein accession | YP_660481 |
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| Protein GI | 109897226 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC TCGTATATTA CGATCTTAAG CGCACGGCGA CCATGACACC GAGTATGCCG
GTTCAAGTGG CACGTGAATT AGGCAGACGC ATTGTTGCTG GCACTTATGA GCCAGGCACA
CTTATCGATG AAGAAAACAC CTTAGCGAAT CGTTACCAGG TCAGCCGAGT GGTTATTCGC
GATGCAGTTA AAATATTAGT CGGCAAGGGC TTACTCGATG TACGCCGAGG GATTGGTACC
CGCGTTCGCG CTCGGGATCA ATGGTCCATG CTGGATGATG ATGTGCTTGC ATGGCACTTA
TCTGCACCAC CTAACCCTTC TTTCTTAAAG CAGTTGATGG AAATCCGCTT AGCGTTTGAG
CCTAAAGCCT CTCGCTGGGC AGCTGAGCGT GCAACAGATG AAGACATAGC TGAAATCGAA
GCCGCTTGTG TCGCTATGGA GCAAGAAGAA GGCACGGTGG AGAACTTCAT TATCGCTGAT
GCTGAGTTTC ACCGCGCGGT TTTGAGAGCC GCCCACAATG AGTTTTTAAA AGCGATGGAG
GGCGTCATTT ACTCTGCTTT GTTAGTTAGT ATTCGCTTAA CCAACAAAGA TCCAAGAGCA
AATAAAACCT CAGTGCCATT TCACCGTGAA GTGTGTAACG CCATTGCCAG CCGCAATGCG
AACTTGGCAG AAGAGCTAAC CGCAAACCTG CTTAAAGATG CAGATCACCG TTTGCTTGAT
AAAGTCGCTA AGTACAAATA G
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| Protein sequence | MSELVYYDLK RTATMTPSMP VQVARELGRR IVAGTYEPGT LIDEENTLAN RYQVSRVVIR
DAVKILVGKG LLDVRRGIGT RVRARDQWSM LDDDVLAWHL SAPPNPSFLK QLMEIRLAFE
PKASRWAAER ATDEDIAEIE AACVAMEQEE GTVENFIIAD AEFHRAVLRA AHNEFLKAME
GVIYSALLVS IRLTNKDPRA NKTSVPFHRE VCNAIASRNA NLAEELTANL LKDADHRLLD
KVAKYK
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