| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0853 |
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| Symbol | |
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| ID | 4173702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1005941 |
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| End bp | 1006849 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053856 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_660435 |
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| Protein GI | 109897180 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.255595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGATTTG AACAACTCGA CCTGAACTTG CTTGTCGCAC TAGACATTTT GATTGAAGAG
CAAAATATTA CACGCAGTGC TGAGCGACTC CATCTCTCAC AATCTGCTAC CAGTGGCATA
TTGTCGAGGT TGAGGGCATT TTTTGAAGAT GATTTATTAG TACAAATTGG TAAAAAAATG
CAGCCTACCC CCTTTGCGCT CGAGTTACAG GGGCCGGTAG CAGGGGTGCT CGCCACGGTA
CGTGGTTCGA TCATTGGCAA GAAAGCCAAT AACCCAGAGC ACAGTGAGCG TCATTTTAAG
ATCATCGCTT CTGATTATGT TATTCAAGTT CTACTGAGCC ATGTAGTGGC AGAAGTCGCT
AAGCTAGCCC CTAAGGTGAC CTTTGAATTC TTGACGCCTT TTGCCCACGA AATGAATATT
TTATCCAAGG GCGGCGCTGA TATGATGGTC GCGCCAGAAG CTATCATTTT AAGCAATTAC
TCAAGTGCTT CGCTGATAAG TGATGAATTA GTCTGTATCG CGGATATAAA CAATACAGAA
GTCGGTGACG AACTCACCTT CGAGCAATTT AATGCTATGG GTCATGTTTC GGTCGGCTTT
GCTCGCGTTA GCTTATTAAG TATTGAGCAA TGGTTAATAA ATACCTTGGA AACAAACCGC
AAGATCGCAG TGATCACCAG TGATTTTTCA ACCATGGTTT ATGCGTTGTT AAATACCAAT
CGAATTGCCA TATTACCTCG ACACTTTGTA GATATGCACA TACAACGCGA AGCAGTGAAA
ACGGTCAAGT TACCCTTCTC CCCACCTAAC TTGAAAGAAA GCTTAATGTG GCACCCTACT
TTGGATAATG ACCCTATGCA CAGATGGTTA CGGGAAAAAA TTATTGAATG TGCCGGCAAG
TTTGAATAA
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| Protein sequence | MRFEQLDLNL LVALDILIEE QNITRSAERL HLSQSATSGI LSRLRAFFED DLLVQIGKKM
QPTPFALELQ GPVAGVLATV RGSIIGKKAN NPEHSERHFK IIASDYVIQV LLSHVVAEVA
KLAPKVTFEF LTPFAHEMNI LSKGGADMMV APEAIILSNY SSASLISDEL VCIADINNTE
VGDELTFEQF NAMGHVSVGF ARVSLLSIEQ WLINTLETNR KIAVITSDFS TMVYALLNTN
RIAILPRHFV DMHIQREAVK TVKLPFSPPN LKESLMWHPT LDNDPMHRWL REKIIECAGK
FE
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