| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0831 |
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| Symbol | |
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| ID | 4173972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 974691 |
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| End bp | 976304 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053834 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_660413 |
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| Protein GI | 109897158 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000199076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGAA AAATGATACC GATGAAAAGT CTACTAGCTG TCACTGTTGC CACTCTACTC
GCTGCGTGCT CGGAACAACC GCTGGAAATG TCTTCCACCA CGAAAACGTC GACCACTGAG
AGTAAATCCA CCGCTATGGA TGCACCCGAT TACAGTGAAA AATTATCTGA CATTCGCAGT
GTCGCCAATC AAGGGCCCTT CAAAGCCAAT TGGGAGTCAC TTAAAGACTA TGAGATCCCA
ACTTGGTACC AAGATGCCAA GTTCGGCATT TTCATTCATT GGGGGGTATA TTCTGTGCCT
TCGCATAATG GCGAATGGTA TCCGCGAAAA ATGTATCTAA GCGACACCGA AGAGTTTGCC
TATCAACAAG AAAAACACGG TCCACTCACA GAGTTCGGCT ATAAAGATTT CATTCCACAG
TTTACCGCTA AAAAGTTTGA TGCAGATAAG TGGCTGGACG TCGTCAAAAA CTCAGGTGCT
AAATATATCG TGCCTGTAGC TGAACATCAC GATGGTTTCT CTATGTACGA TAACTCCTAC
TCCCGATGGG ATGCGGTTGA AATGGGACCG AAAAGGGATG TCATCGCTGA ATTAAAAACC
GCAGCGAGCA AAGCTGATAT CTACTTTGGT TTATCAAGTC ACCGCGCTGA GAACTGGTGG
TTCTTCGAAG GTGGGCGAGA AGTGCCTAGT GATGTACAAG ATGAAGCCTA TCGCGACTTA
TACGGCCCAG CGATCAGCCG TGAAACTTCC GAAGCAGGTG AAACCCCGCC TACCCAAGCG
TTTTTAGATG ATTGGCTATT GAGAACCGTA GAAATTGTGG ATAAATATGA GCCTGATCTG
ATTTGGTTTG ATTGGTGGAT GGCATCCGAG CCGTTTCATC AACATGTAAA AGAGTTCACC
AGCTATTTCT ACAATAAAGG CTCGAAATGG GACGACATGC CAGCTCTTAA CTACAAAGAC
TTAGGTGAAT TTCGCTCGTT CCCACCAGGT TCAGCAGTAC TGGATATTGA ACGTGGACAA
ATGTCCGACA CCTATGAACA TTTCTGGCAA ACAGATACCT CTGTGTCAAA AACCTCTTGG
GGCTATGTGA CCAACCCGTC TTACCGAGAT GCCAACTCAT TAGTCGATGA TTTGATTGAT
ATTGTCAGTA AAAATGGCTC TATGTTACTC AATATCGGCC CCAAGCCGGA CGGCACAATA
CCGCAACAAG AAATTGATTT ACTGGCCGAA ATTGGCAGTT GGTTAAAACT TAACGGTGAA
GCGATTTACA GCACCCGCCC ATGGGTAACC TTTGGCGAAG GCTCTACCGT TGTTATCGAT
GGTACCAACT CCAACGATGC TGAGGAGCAC CGTAAAGACT TTAATAGTAG TGATATTCGT
TTTACCCAAA ACGGCGATGC GTTATACGCG ACTTTGATGG CTTGGCCGGA GAATAGTGAT
GAACTTACGA TCCGTTCGAT TAATAGCGAC AATTATCCTG ACAAGATTGC CAGTGTCACC
ATGCTGGGCC ATGACGAAGC GTTAACCTTT TCACAAACTG AAAAAGGGTT AACCATCACG
TTGCCCGACA CTTCACCGTC ACGATTTGCT CAAGTCATTA AAATCACGAA ATAG
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| Protein sequence | MARKMIPMKS LLAVTVATLL AACSEQPLEM SSTTKTSTTE SKSTAMDAPD YSEKLSDIRS
VANQGPFKAN WESLKDYEIP TWYQDAKFGI FIHWGVYSVP SHNGEWYPRK MYLSDTEEFA
YQQEKHGPLT EFGYKDFIPQ FTAKKFDADK WLDVVKNSGA KYIVPVAEHH DGFSMYDNSY
SRWDAVEMGP KRDVIAELKT AASKADIYFG LSSHRAENWW FFEGGREVPS DVQDEAYRDL
YGPAISRETS EAGETPPTQA FLDDWLLRTV EIVDKYEPDL IWFDWWMASE PFHQHVKEFT
SYFYNKGSKW DDMPALNYKD LGEFRSFPPG SAVLDIERGQ MSDTYEHFWQ TDTSVSKTSW
GYVTNPSYRD ANSLVDDLID IVSKNGSMLL NIGPKPDGTI PQQEIDLLAE IGSWLKLNGE
AIYSTRPWVT FGEGSTVVID GTNSNDAEEH RKDFNSSDIR FTQNGDALYA TLMAWPENSD
ELTIRSINSD NYPDKIASVT MLGHDEALTF SQTEKGLTIT LPDTSPSRFA QVIKITK
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