| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0828 |
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| Symbol | |
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| ID | 4173969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 969541 |
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| End bp | 971043 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053831 |
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| Product | lipolytic enzyme, G-D-S-L |
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| Protein accession | YP_660410 |
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| Protein GI | 109897155 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0189609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAATT CACACATGAA TATATTGCTC TTGAAAATAA AGTTACTTGG TTCGCAGAAT
CAAATCGAAC GGTTTTCTAC CGTTTTAAAA TACATGTTCA TTTCAATTGG GCTAGTGACA
TTGCTTTTTA GTTATCGCGT AGCGTCTATG CCGCGCATGC TTTCAAGCAC GGCGCAGTTG
ATGAGTGAGG ACGTATTGGT CTTTATTGGT GACTCAATTA CCCATGGTGG CAGTTATCAC
CAAAACATCG CGCTTTTTAA TGCGACGCGC TTTCCGCAAA ATCACGTCTT TTACGTAAAT
GGGGGTATTT CTGGTGACAC CGCTTTAGGT ACCCTGCGCC GATTTGACAG GGATATCGCT
CCGCACCGGC CTGCTGTAGC GACAATCATG CTAGGCATGA ATGATGTTGG GCGCTATTTA
TACGAAACGC CAGCGAAGGA CGAAGCTGCG CGCATTGCGC GAGACAAAGA AGCAGCAGTA
ATACAAACCG CCTATTTAAC TAATATGCGA AAAATTATGC TCAGATTAAA CGAGCTTGGA
ACAAAGATCG TGCTCTTAAC ACCTTCTATT TATGATCAAA GTGCCCGGGT TGCTTCTGCC
AATAACTACG GTGTGAACGA CGCGTTGCAG GCTTTCTCTG GCGAACTGAC CAAAGTTGCC
AAAGAGTTTG GTGCAGAAGT AGTGGATTTT CAGCAACCCA TGCTTGAGGT GAACGCTGCG
CTACAAGTCA ATGATCCTAG CGCTACTTTG GTCGGAGCTG ACAGAGTTCA TCCTGGCGAG
GCAGGGCATT TCGTTATGTC GTATGCATTT TTAGAGGCTC AGCAAGCAAA TAAATACGTT
GCTAATATTT CGATTGATGT CAGCAGAGAG AATCTCAATG TATTTGAAAA CTGCGCTCTT
AACGGTGACT TACGCACTGC TAGAGACTTT GTAGGCTTCT CATGCGAGGC AGCAGCATTG
CCGTTTCCTG TTTCGAAAGC CCAAAAACAA GCATTGCAAT GGGTACCTTT TATGGACGAG
CTAAATCAAC AGCGACTTCA AATTAGGGGC CTCAAAAAAG GCCAATACAG CCTTCATATT
GATCAAAAGT TTGTTGGTAT TTTTTCGCAC TCTTTGCTTT CAAGTGGCGT TAACTTAGCG
GCGATTGAGA CCACGCCTAT GTACCAGCAA GCATTAGCAG TGAAAGCGAT AAATGACCGC
AGAGCGTCTA CTTCGCGCTT GTTGCGTGAT ATCGCGCAGG TCAAATATTC GATGCTAGAC
CATTACCCAG ATACTGACAC ATCAGACCTT TCTGCTGTGT CTCAAGTGCT TTTAGCCCAT
GTTGAAAAGA GCGCTAATGA GCCTTGGTAT GGGTATTTGA AAAAGCAAGT GAATACGTAT
TTAGCTGAAG TCGATAACGA AACGCATTAT CGCGATGAAG TAGTTTCATT ACATAAGAAA
ATGTACGAAG TTAATAAGCC GGGAACACAT ACTTACACGC TCAGTTTTGT TGGCGTGGAA
TAG
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| Protein sequence | MINSHMNILL LKIKLLGSQN QIERFSTVLK YMFISIGLVT LLFSYRVASM PRMLSSTAQL
MSEDVLVFIG DSITHGGSYH QNIALFNATR FPQNHVFYVN GGISGDTALG TLRRFDRDIA
PHRPAVATIM LGMNDVGRYL YETPAKDEAA RIARDKEAAV IQTAYLTNMR KIMLRLNELG
TKIVLLTPSI YDQSARVASA NNYGVNDALQ AFSGELTKVA KEFGAEVVDF QQPMLEVNAA
LQVNDPSATL VGADRVHPGE AGHFVMSYAF LEAQQANKYV ANISIDVSRE NLNVFENCAL
NGDLRTARDF VGFSCEAAAL PFPVSKAQKQ ALQWVPFMDE LNQQRLQIRG LKKGQYSLHI
DQKFVGIFSH SLLSSGVNLA AIETTPMYQQ ALAVKAINDR RASTSRLLRD IAQVKYSMLD
HYPDTDTSDL SAVSQVLLAH VEKSANEPWY GYLKKQVNTY LAEVDNETHY RDEVVSLHKK
MYEVNKPGTH TYTLSFVGVE
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