| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0823 |
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| Symbol | |
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| ID | 4172320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 961282 |
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| End bp | 962886 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053826 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_660405 |
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| Protein GI | 109897150 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000144391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGCT TTACATATGC CAGCGCGATA ATAGGGATGT TATTGAGCGG ATTTTTAACG
ACACACGCAG TTGCGCAAAA AGATACACAA GTAAATGCGA AAATAGGCGC GCAAGGCGTC
TCGTCTGCCC ATTCAGAAGC CTTTATTTCT GGTCCGTATG AAGCCACGTG GGACTCACTA
AAACAGTATC AAACCCCACA GTGGTTCCAA GATTCAAAGT TGGGGATCTT TATACATTGG
GGTCCCTATG TGGTGCCTAA ATATTTAGGG CCATTTTATG GATACCATAT GTATCGAGAG
CAAACGGTTG ATATTAAAGG CAATCCGAAC CCAGATAGAG TGAATAAAGT GTATCAGCAC
CACATAGAAC ACTATGGTGG CACAGAAGAA TTTGGCTACA AGGACTTCAT TCCAAAATTT
CACGGTAAAG ACTTTGATGC AAAGCAATGG ATAGCCTTAT TCGAAAAAGC TGGGGCTAAA
TATGTGGTCC CTGTTGCCGA GCATTGCGAC GGTTTCGCCA TGTATGATTC CAACATTACC
CGCTGGGACG CCGTCAATAT GGGCCCTAAA CGGGACGTTG TGGGGGAAAT ATTCGAAGCC
GCTAGAGCAA AAGGTATGAA GGTAGGCATG TCATCTCACT ATGCTTACGG CTGGTATTGG
TGGGGATACA AAGAAGGGAC GGACACAGTT GACCCCGCCT TTGAGGACTT TTATGGCAAA
CCGCATGCGA TTACCGACCC CCACAGTGAA GAACATGTAA ACCAATGGTT TGCTCGTAGT
ATGGACATGA TGCAGCAGTA TGAGCCTGAC TTGCTCTGGT TCGATTTAGG CTTTTCTAAT
CCTGAGTACG AAGAAAAGCG TAAATCGCTT CTCGCTCAAT ACTACAACCA GGGGGTTAAG
AATGAGCAAG GCGTCGTACT TAACTATAAG AACATTAGCT ACAAGCCTAT ACCTGATGGC
TCCGCGGTAC TTGATGTGGA GTCAGGTAAA TTAGACCGAA TACGAGATAT GCCTTGGCAA
ACCGACATGT CGTTAGGTGG TTGGCGCTGG TCTTACAATG ACGATTGGCA AACCATGCCA
GCGGATAAGT TGATTGGTGA CCTGATTGAT ATTGTCAGTA AAAACGGTTC CCTTCTGCTC
AATGTTGCGC CTGATGTGAA TGGCGTTATT TCTCAAGATC AAGTCGACGT GCTTATGGAG
CTAGGGGGAT GGCTGGATAA AAATGGTGAG GGGATTTACG AAACAAGGCC ATTCAGTGTT
TTCGGCCAAG GCCCTACCAA CGCCAAACTT GTGCTGCACG GCAATCACAA AGACACAGGT
TATACCTCCC GCGATATCCG TTACACCCGT AAGGGCCAGT CTATCTATGC TTTTGTGCTT
GATTGGCCAG AAAAGCAAGA CACTGTTTCC TTCAACGCCC TTGGCAGTGA GCAACATCAT
CTTATCGATC CGATAAAACG TGTCTCGTTG TTGGCCAACG ACGAGGAACT GGTTTGGCAA
CAAGATGCCG ACAAACTCAC AGTAACGCTA CCGAGCAAGC CCGCGGGAAA CTATGCCCTT
GGGATCAAAA TCGAATTAAC TGACCCTCCC CCTGACGTGC TTTAA
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| Protein sequence | MARFTYASAI IGMLLSGFLT THAVAQKDTQ VNAKIGAQGV SSAHSEAFIS GPYEATWDSL
KQYQTPQWFQ DSKLGIFIHW GPYVVPKYLG PFYGYHMYRE QTVDIKGNPN PDRVNKVYQH
HIEHYGGTEE FGYKDFIPKF HGKDFDAKQW IALFEKAGAK YVVPVAEHCD GFAMYDSNIT
RWDAVNMGPK RDVVGEIFEA ARAKGMKVGM SSHYAYGWYW WGYKEGTDTV DPAFEDFYGK
PHAITDPHSE EHVNQWFARS MDMMQQYEPD LLWFDLGFSN PEYEEKRKSL LAQYYNQGVK
NEQGVVLNYK NISYKPIPDG SAVLDVESGK LDRIRDMPWQ TDMSLGGWRW SYNDDWQTMP
ADKLIGDLID IVSKNGSLLL NVAPDVNGVI SQDQVDVLME LGGWLDKNGE GIYETRPFSV
FGQGPTNAKL VLHGNHKDTG YTSRDIRYTR KGQSIYAFVL DWPEKQDTVS FNALGSEQHH
LIDPIKRVSL LANDEELVWQ QDADKLTVTL PSKPAGNYAL GIKIELTDPP PDVL
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