| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0818 |
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| Symbol | |
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| ID | 4172315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 952867 |
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| End bp | 953748 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053821 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_660400 |
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| Protein GI | 109897145 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAATTG AACAATTCGA AACTGGCTCG GGTGGGTTTG TGTGGCAAAA TCTGCAGCCT
GATGCGCTAT TCAGCAAGGT GCATTTTCAT GTTTATGCCG CCTTTGATAT GCAAATAGGG
GCAGAGTGGA ACGGTAGCCA GTTCGTTAAT CACTACAATC GAATTTATTA TGTCGAGTCT
GGGGTAGCTG AATTACATTT TAGCGATCGT GTGCTCATCA TGGAGCCGGG GTACTTATAC
CTCATTCCGC CTTATCAATT ACTGTCTCAT TCAGCTCAAG GAAAGCTAGG CTTTAAGTGG
GTCCACTTTC AGGCGAGTCT TGATGAAGGG TTGGATTTAT TTATGCTATA CGGTAAGCCG
TGTAGAGTGA AATGCACCAA TCCGGATGCA ACAAGCACCT TGTTTGATGA GCTAATTTCA
GCAATGCAGA CGATGCGCCC AAGCGCGGTG CTAGAGCGTC AGAGCTTACT GTTAAACCTA
CTGCGGCCAT TTATGCATAT TTTTGATGAT GTGCCCCAGC AGCGTAAACA TTTGTTGCAC
CCAGCGCTTG TTTCATCCCT TAGCGTCATC AATCAACACG TCGCAAACCC GCCAAGTTTG
ATCGCACTTG CCGAGGCGGC AAACATGTCG CCTGAGCATT TTTCACGAAA ATTCAAAGCC
GCGTTTAATG TTTCACCCAA ACGCTATATG GTGCACAAGC AAATCGCTTT AGCGAAACAG
CGTTTGTTAT TGGGGGCTGA CAGTATTGAT AGAGTGGCTG AAAGTTGCGG GTTTTGTGAT
ATTTTTCATT TTTCTCGCAC GTTCAAAAAG GAAACGGGCG TGACGCCCAG CGCGTTTCGC
AAAGAGTACA CGATCCGCGC TTTTCCCCCG AAGCCTAGTT AG
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| Protein sequence | MLIEQFETGS GGFVWQNLQP DALFSKVHFH VYAAFDMQIG AEWNGSQFVN HYNRIYYVES
GVAELHFSDR VLIMEPGYLY LIPPYQLLSH SAQGKLGFKW VHFQASLDEG LDLFMLYGKP
CRVKCTNPDA TSTLFDELIS AMQTMRPSAV LERQSLLLNL LRPFMHIFDD VPQQRKHLLH
PALVSSLSVI NQHVANPPSL IALAEAANMS PEHFSRKFKA AFNVSPKRYM VHKQIALAKQ
RLLLGADSID RVAESCGFCD IFHFSRTFKK ETGVTPSAFR KEYTIRAFPP KPS
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