| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0771 |
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| Symbol | |
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| ID | 4173949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 883008 |
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| End bp | 883532 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053773 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_660353 |
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| Protein GI | 109897098 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTAT CAGAAGTCGA TATAAACCAT AGTGAACAGC CAGTTGTTGA TTTGCCGATC
CGTTTAGAGG AGGTGATTAG CTTAGTTATA TTTTGGGGAC TCGCCATTTT ATTGTTTGCA
CAATTTTTCA GTCGTTACGC TCTCGATGCT TCCCTAGGAT GGTCGGAAGA ATTGGCCCGT
TACTTACTTA TTTTGCTGGC GTTTTCAGGG GCGAGTATTG CCACCAAAAA CGATGCGCAT
ATTGGCGTCA CCCTGTTGCA TAGATACTTG CCCGTCAAAA TGCTTAGTGT GCTGCAACTG
TGCATCGCTT CGCTCAATTT AGCTGTGGTG CTGCTGTTAA TGGTATATGC CAGCCAAATT
GGCTTTGCCT TGTCGCTTTA CACACTGGCT TCGCTGCCCA TATCAATGAG TTGGTTTTAT
GCCCTCATCA CGCTGTTTTT ACTCTTAATG GCTGGTAGAA GTGTTTTAGT GATAAAGCAC
CGTTGGTGCT CAATGCGTCA GGCACATATG ACTGAGGTGG CGTAA
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| Protein sequence | MSLSEVDINH SEQPVVDLPI RLEEVISLVI FWGLAILLFA QFFSRYALDA SLGWSEELAR
YLLILLAFSG ASIATKNDAH IGVTLLHRYL PVKMLSVLQL CIASLNLAVV LLLMVYASQI
GFALSLYTLA SLPISMSWFY ALITLFLLLM AGRSVLVIKH RWCSMRQAHM TEVA
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