| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0757 |
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| Symbol | |
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| ID | 4173935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 860913 |
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| End bp | 862352 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053759 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_660339 |
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| Protein GI | 109897084 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATACGA CAGATACCAA CACCTTCATC ATCGCTACTT CGTCCGTCGC CGACGCTACT
TTACCCGTCG CCGACGCTGT AGCAACTAAA AACACTGCAG TACTAGAAAC GACGGGTCAG
TCATTAGTGC AGACGGCGCA ACATTACCTA GAGGTAGCCC ATCAGCATCT CTTTATGGCC
GATACCTACA TACAACTTGG CTTAATTGCT GGTATCTATT TATTAGCATA TTGGTTTGGT
AGTAAATTAC GAAAGGCGTC TAAATTCGTC GATAACCAGC CTGATTCAAA AGACCACCCC
ATACGAAAAA TTACCTATCG TATCGACAAA ATGCTCTTTC CGCTGATTGC GATTATTCTT
CTAAAGGTGG TTAGCGAGTT TAGTGCCAGC ATTATAGGGG CTAACTGGAT CTTAGATTTA
GCCTTAACCA TCGCCGTGCT GTTGTTTGTT AATTCAGTCA TTAACGTGTG TGTGTCACAC
CCGATACTCG CCAACTTATT AAAGTGGATG ATGCTGCCCT TATTGTTTCT GCATATGGTG
GGATGGCTAG CGGGGATTAT TGAGGTGCTG CAGGGCTTGA GCATTAACCT CGGAAATATT
GAAATCTCAG CCTACGGACT GGCGCGAGTG TTAATTTTTG GCACGCTGTT GTTTTGGGTA
GGCCGCGCTT CGAATAACGT GGGCCAAGAC ATTATACGTA AGCAAGAGTC CTTGGATATC
CGCACCCGAG AAGTATTCGC TAAGCTGTTT GAAGTCGCTT TGGTGTGTGT TATTGCCTTG
CTACTTCTGA ATGTGATGGG CATCAACTTA ACCGCACTAG CCGTGTTTGG TGGCGCAGTG
GGCGTCGGTT TAGGCTTTGG TTTACAGTCT ATCGCATCAA ACTTCATCTC TGGCATTATC
ATACTCCTTG ACCGCTCAGT GACCATTGGC GATTACATTG AAATGGAAGA CGGACAAAAG
GGCTTCGTAA GGCATTTCAA AATGCGCTAT ACCACCCTTG AAACCTATGA TGGCAAAGAC
ATCATGGTGC CTAATGAAAA GTTTATCTCT AGCACATTTG TTAACTGGTC TCACAAGAAC
CCCAAGCAGC GATACCGCGT GGACTTCTCG GTGGCTTATC AAACCGACAT TCGAGCCATG
GTCGAAATAA TAAAAGAGGT AGTTGCTGAG CACCCGCAAG TGTTGAGCGG TGATGAATAC
CCCATTGAAG AGCGACCAGA TTGCGAAATT GATAGCTTCG GGGATTCAGG TGTAAACGTG
TTTGTAGAAT TTTGGATGGA AGGCATTGAT GACGGTAAAA ATCGCGTCGG CGGTGATTTA
ATGCTGTCGA TCTTTGAAAC GCTACGTGAA CACAACATCT CCATACCGTT CCCGCAGCGT
GAAGTACGTG TTCTTAATAC TGATTATACG GTAACTAATA CCACCGAGAA GAATAACTAG
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| Protein sequence | MDTTDTNTFI IATSSVADAT LPVADAVATK NTAVLETTGQ SLVQTAQHYL EVAHQHLFMA
DTYIQLGLIA GIYLLAYWFG SKLRKASKFV DNQPDSKDHP IRKITYRIDK MLFPLIAIIL
LKVVSEFSAS IIGANWILDL ALTIAVLLFV NSVINVCVSH PILANLLKWM MLPLLFLHMV
GWLAGIIEVL QGLSINLGNI EISAYGLARV LIFGTLLFWV GRASNNVGQD IIRKQESLDI
RTREVFAKLF EVALVCVIAL LLLNVMGINL TALAVFGGAV GVGLGFGLQS IASNFISGII
ILLDRSVTIG DYIEMEDGQK GFVRHFKMRY TTLETYDGKD IMVPNEKFIS STFVNWSHKN
PKQRYRVDFS VAYQTDIRAM VEIIKEVVAE HPQVLSGDEY PIEERPDCEI DSFGDSGVNV
FVEFWMEGID DGKNRVGGDL MLSIFETLRE HNISIPFPQR EVRVLNTDYT VTNTTEKNN
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