| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0748 |
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| Symbol | |
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| ID | 4173099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 852899 |
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| End bp | 854101 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053750 |
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| Product | saccharopine dehydrogenase |
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| Protein accession | YP_660330 |
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| Protein GI | 109897075 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGTG TTCTGATTAT CGGCGCTGGC GGCGTGGCTG CTGTCACTAT TAAAAAATGT
GCTCGTTTAC CTGAGCTATT TGATGAAATT TATCTTGCTA GTCGTACGGT TTCTAAATGC
GAAGCCCTAC AACAAGAAGT GGGTATTGAC CGCGTGAAAG GTGTATTTGC CGTTGACGCG
GATCACGCAA GCGAAGTAGT AAAAGTGATT AATCAGGTCA AGCCTGACTT GGTTATCAAC
CTTGCCTTGC CATATCAAGA TTTAGCCATC ATGGACGCGT GTTTAGAAAC CGGCGTTCAT
TACCTAGATA CTGCAAACTA TGAGCCAAAA GATGTGGCTA AATTTGAATA CTCTTGGCAG
TGGGCGTATC AAGAAAAATT CGAAAAAGCA GGCTTAACTG CGTTACTCGG TAGTGGCTTC
GATCCGGGCG TAACTAACGT TTATACGGCG TATGCCGCTA AGCATTATTT TGATGAAATT
CACTACTTAG ATATCGTTGA TTGTAACGGT GGCGATCACG GTCAAGCGTT TGCAACGAAC
TTCAATCCAG AAATCAATAT TCGTGAAATC ACTCAGCGCG GTCGTTTCTT CGAAAATGGG
GAATGGAAAG AAACGGATCC CCTAAGCGTT CGTGAAGATT TAGACTATCA AAACATTGGT
GTGCGCGCTT CATACTTGAT GTTCCATGAA GAACTTGAGT CTATCGTTAA GCACTTCCCT
ACGCTGAAAC GTGCCCGCTT CTGGATGACC TTTGGTGACG CGTACCTTAC ACACCTTAAA
GTGCTTGAAG GCATCGGCAT GACCAGTATC GAGCCAATTG ACTTCCAAGG ACAGCAAATT
GTGCCCCTTG AGTTCTTAAA AGCAGTGTTA CCGAACCCGG GCTCACTCGC TGACGGTTAC
ACAGGCATGA CGTGTATCGG TACTTACATT ACCGGTATGA AGGATGGCAA AGAGAAAACT
ATCTTTATTT ACAATAACTG TGATCACGCA GCGTGTTTCG CAGAAGTGGG GGCACAAGCT
GTGTCATACA CCACAGGCGT ACCCGCCATG ATCGGTGCAT CCTTGATGCT AAGCGGTAAA
TGGAAGAAGC CTGGCGTGTG GAACATGGAG CAGTTTGACC CAGACCCGTT CATGGACATG
CTAAACCAGC ACGGCCTGCC TTGGCACGTA ATGGAATGTG ACGAAAGCCC ATTTAGCAAG
TAA
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| Protein sequence | MSRVLIIGAG GVAAVTIKKC ARLPELFDEI YLASRTVSKC EALQQEVGID RVKGVFAVDA
DHASEVVKVI NQVKPDLVIN LALPYQDLAI MDACLETGVH YLDTANYEPK DVAKFEYSWQ
WAYQEKFEKA GLTALLGSGF DPGVTNVYTA YAAKHYFDEI HYLDIVDCNG GDHGQAFATN
FNPEINIREI TQRGRFFENG EWKETDPLSV REDLDYQNIG VRASYLMFHE ELESIVKHFP
TLKRARFWMT FGDAYLTHLK VLEGIGMTSI EPIDFQGQQI VPLEFLKAVL PNPGSLADGY
TGMTCIGTYI TGMKDGKEKT IFIYNNCDHA ACFAEVGAQA VSYTTGVPAM IGASLMLSGK
WKKPGVWNME QFDPDPFMDM LNQHGLPWHV MECDESPFSK
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