Gene Patl_0742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0742 
Symbol 
ID4173093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp846470 
End bp846901 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content44% 
IMG OID638053744 
ProductOsmC-like protein 
Protein accessionYP_660324 
Protein GI109897069 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1764] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID[TIGR03562] peroxiredoxin, OsmC subfamily 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTG TTAAATCTGG CAGCGCAACC TATAAGCCAT TAGGTAAGAA AGGCAAAGGC 
AGTATTTCTA CAGAAACTGG CGCATTATCA AATCACCCAT ATGGCTTCAA TACACGTTTT 
GAAGACGGCA AAGGCAGTAA CCCGGAAGAA CTCATCGGTG CTGCGCATGC AAGCTGCTTC 
ACCATGGCTC TTTCGCTGGC CCTAGCAGAT GCAGGTTACG AAGACGGTGA ATTAAAAACC 
ACAGCGAAAA TCAGTTTAGA TAAGACAGAT AATGGCTACA AAATTAGCCA GTCAGCATTG 
AGCTTAAGCG CAACAGTAGC AGGGATATCC GAAGACGAGT TCTCAGAAAT AGCACAAGAA 
GCAAAAGCCA ACTGCCCCGT ATCAAAACTG CTAGATACCA AGATAACCTT AGCAATCGAT 
CTATCCACCT AG
 
Protein sequence
MSIVKSGSAT YKPLGKKGKG SISTETGALS NHPYGFNTRF EDGKGSNPEE LIGAAHASCF 
TMALSLALAD AGYEDGELKT TAKISLDKTD NGYKISQSAL SLSATVAGIS EDEFSEIAQE 
AKANCPVSKL LDTKITLAID LST