Gene Patl_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0728 
Symbol 
ID4172185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp826174 
End bp826650 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content42% 
IMG OID638053730 
Producthypothetical protein 
Protein accessionYP_660310 
Protein GI109897055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.198898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACAT CATTATTGAG TTCACTCAAG GTAACTACTC GCCCGATCAT CGAGCCAAAG 
CCACCCATTA TCGGCAAACG TATGAAACTG ATTGAAAAAC TAGAGCAGCA GCAAGAAATG
GCAACTTGCA TGCTTGAAGG GAAACCCTTC GAAGCCTATC GCGAAAAAAT GGTCAAGGAT
CCTGTCACTG GAGAGCGTAC AAAGCAACGT CGAGCCGTAT CGGTTAAACC GTGGTATTAC
GACAGCGATG GACATTACTT TTTAGAGGTA AAGGTAAACA ACAAACCCAT TGATATACAA
GAAGGCAAAC CTGCCATTGA TATAGGTGAT AAAGCCGAAT TACCCAAAAC ATTTGAAACC
ATCATTCACG CTGTGGAAAA AGGCGAATTG GATAATTTTA TCTTAGCTAG AGTCACTATT
GGTAAGAAAA CCATAGCGGC CAAAACGGCA AATCAAAAAG TGTCAGGCAA GACCTAA
 
Protein sequence
MTTSLLSSLK VTTRPIIEPK PPIIGKRMKL IEKLEQQQEM ATCMLEGKPF EAYREKMVKD 
PVTGERTKQR RAVSVKPWYY DSDGHYFLEV KVNNKPIDIQ EGKPAIDIGD KAELPKTFET
IIHAVEKGEL DNFILARVTI GKKTIAAKTA NQKVSGKT