| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0724 |
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| Symbol | |
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| ID | 4172180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 818799 |
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| End bp | 820493 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053726 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_660306 |
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| Protein GI | 109897051 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGCT CAGCGCCTAA AAGTGCGTTA TACATTCCTC ATTCAGGCCC TTCTTTGCTT
GAAACCCCCT TGCTCAATAA AGGCAGTGCG TTTACTGCCC AAGAACGCGT AGCGTTTAAC
CTTACAGGCT TGATCCCCCC ACGTTACGAA AGTATCGAAG AGCAAGTCGA ACGTGCGTAT
ATGCAGTATT CAAGTTTCAA CGAACCCATC AATAAGCATA TTTATCTGCG TGCAATCCAA
GATAATAACG AGACCCTGTA TTATCGTCTT ATCCAGCAGC ATATTGATGA AATGATGCCG
ATCATTTACA CCCCGACGGT AGGGGACGCG TGCGAGCAGT TTTCAGATAT CTATCGTAGC
TCTCGAGGAT TGTTTATTTC CTATTCAGAG CGTCATCAAA TGGATGACAT TATTCGCAAC
GCCACCAAGC GTAAGGTAAA AGTCATAGTC GTGACGGACG GTGAGCGTAT TCTTGGTCTG
GGCGATCAAG GTATCGGCGG TATGGGCATT CCTATTGGAA AACTGTCTTT GTATACCGCC
TGTGGTGGTA TCAGTCCCGC TTATACGCTT CCTGTTATGC TGGATGTGGG AACTAATAAC
GAAAAATTAC TAAACGACCC TATGTATATG GGCGCGCGTC ATAAGCGTAT TGGCCAAGCG
GAGTACGATG AATTTGTTGA TATGTTTATC AAGGCGGTCT TAAAGCGCTG GCCTGAAGTG
ATGCTTCAGT TCGAAGATTT CGCCCAGCCT AATGCGATGC CATTACTTGA GCGCTACCGC
GATAAAGTAT GTTGCTTCAA TGACGATATT CAGGGCACCG CAGCTGTAAC GGTGGGGACT
ATTTTAGCGG CATGTAAAAC TAAAAATGAA AAGCTTAGCG ACCAACGCGT GGTGTTCGTT
GGTGCAGGAT CTGCGGGTTG CGGTATCGCT GAGCAAATCA TCAAGCAAAT GACGAGTGAG
GGGATCACTG ATGCGCAGGC CCGTAGTCAA GTCTTCATGA TTGACCGGTT TGGTTTGGTC
ACAGACGATA TGGAAGGCTT ACGGGACTTC CAATTCCGAC TTGCGCAGCC GTTGGCTAGT
CAAGCAACAT GGCAAAAAGC GGCGCAATAT CCGTCATTGT TTGAAACCGT GAGCCAAGTC
AAACCCAGTA TTTTAATAGG GGTATCAGGG CAAGCGGGTT TATTTACCGA GCAAGTCATT
AGGGAAATGA AACGCAACTG CGATTTGCCG ATCATCTTTC CGTTAAGTAA CCCTTCTCGT
CAGGTAGAAG CCCGTCCTGA AAACGTTATT GAGTGGACTG ACGGCGAAGT GATTATCGCT
ACCGGTAGCC CATTTAAGCC TGTGGAATAT AAGGGGAAAA CCTACCCTAT CGCACAATGT
AACAACAGTT ATATATTCCC AGGAATCGGA TTAGGCGTAC TGGCAGCCAA GGCTAGTTTA
ATCAGTGACG AGATGCTGAT GGCCACCAGT GCTGCGCTCG CCAATGCGTC ACCTCTGGCG
AATGGTACAG GGCAAGAATT GTTGCCACCA CTGACAGGCA TTGCGCAGCT AAGCAAGAAG
ATAGCCTTTG ATGTAGGCAA AGTCGCTCAG AAACAAGGGT TAGCCCTAGA AGTGAGTGAT
GAAATACTCA GTGAGCGCAT TGAAGGGAAT TTTTGGCAGG CAGAATACCG CCCGTATAAA
CGCGTCAGTA TCTAA
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| Protein sequence | MSSSAPKSAL YIPHSGPSLL ETPLLNKGSA FTAQERVAFN LTGLIPPRYE SIEEQVERAY
MQYSSFNEPI NKHIYLRAIQ DNNETLYYRL IQQHIDEMMP IIYTPTVGDA CEQFSDIYRS
SRGLFISYSE RHQMDDIIRN ATKRKVKVIV VTDGERILGL GDQGIGGMGI PIGKLSLYTA
CGGISPAYTL PVMLDVGTNN EKLLNDPMYM GARHKRIGQA EYDEFVDMFI KAVLKRWPEV
MLQFEDFAQP NAMPLLERYR DKVCCFNDDI QGTAAVTVGT ILAACKTKNE KLSDQRVVFV
GAGSAGCGIA EQIIKQMTSE GITDAQARSQ VFMIDRFGLV TDDMEGLRDF QFRLAQPLAS
QATWQKAAQY PSLFETVSQV KPSILIGVSG QAGLFTEQVI REMKRNCDLP IIFPLSNPSR
QVEARPENVI EWTDGEVIIA TGSPFKPVEY KGKTYPIAQC NNSYIFPGIG LGVLAAKASL
ISDEMLMATS AALANASPLA NGTGQELLPP LTGIAQLSKK IAFDVGKVAQ KQGLALEVSD
EILSERIEGN FWQAEYRPYK RVSI
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