| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0659 |
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| Symbol | |
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| ID | 4173314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 762828 |
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| End bp | 763514 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053662 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_660242 |
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| Protein GI | 109896987 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTCCTT TCTTAATTGC TCCTTCTATT CTTTCAGCTG ATTTTGCCCG CTTGGGCGCA
GAAGTAGACG CTGTTTTAGC CGCGGGGGCT GATGTCATCC ATTTTGACGT AATGGATAAT
CATTACGTAC CGAACCTAAC GATCGGCCCG ATGATATGTA AAGCATTACG CGACTATGGT
GTCACCGCCG ATATTGATGT GCATTTAATG GTTGAGCCGG TAGATGAGAT GATTGTCAGT
TTCGCCAAAG CTGGCGCAAG CCTGATCAGC TTCCACCCCG AAGCATCAAG ACACGTTGAC
CGCAGTATTC AACTGATAAC CGATTCAGGC TGTAAGCCGG GCTTGGTATT AAATCCTGCG
ACGTCATTAG ACTGCTTAGA CTACACGCTA CACAAACTGC ATCACATTTT GTTGATGTCG
GTAAATCCAG GGTTTGGCGG GCAAGCATTT ATCCCCGAAA CCCTTGATAA ACTGCAAATC
GTGAAGAAAA TGGTGCAGGC CTGTGGCCGT GATATCCGAA TAGAAATTGA CGGTGGCGTA
AAAGTCGATA ATATTCGCGC CATCGCCGAA GCAGGTGCAG ATATGTTTGT TGCGGGCTCT
GCTATCTTTA ATCAGCCCGA TTATCGTCAA GTTATCGATG CTATGCGCGC TGAATTAGCC
AACGTTCTCC AACATAATTC CCATTAG
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| Protein sequence | MRPFLIAPSI LSADFARLGA EVDAVLAAGA DVIHFDVMDN HYVPNLTIGP MICKALRDYG
VTADIDVHLM VEPVDEMIVS FAKAGASLIS FHPEASRHVD RSIQLITDSG CKPGLVLNPA
TSLDCLDYTL HKLHHILLMS VNPGFGGQAF IPETLDKLQI VKKMVQACGR DIRIEIDGGV
KVDNIRAIAE AGADMFVAGS AIFNQPDYRQ VIDAMRAELA NVLQHNSH
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