Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0658 |
Symbol | |
ID | 4173313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 761791 |
End bp | 762804 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638053661 |
Product | tryptophanyl-tRNA synthetase |
Protein accession | YP_660241 |
Protein GI | 109896986 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAC CAATTGTATT AAGCGGCTGC CAGCCTTCAG GACAACTTAC CCTAGGAAAT TATGTTGGCG CTCTTCGTCA ATGGGTTGAT ATGCAAGACG ATAACGAATG TCTGTATATG TTAGTCGACA TGCATGCTAT CACAGTGCGA CAAGATCCCG CTGCACTGCA CAATGCCTGT CTCGATGGGC TGGCCTTGTA TGTGGCTTGT GGCATCGACC CGAGCAAGAG CACCATATTC ATGCAATCAC ATGTACCACA GCATGCGCAA CTAGCTTGGA TAATGAACTG CTACACCCAG ATGGGTGAAT TAAACCGCAT GACGCAGTTT AAAGATAAAT CCGCTAAGAA TATTACTAAC ATTAATTCAG GTCTTTACAC TTACCCAGCC TTAATGGCGG CGGATATCTT GCTATATCAA GCGAAACAAG TCCCAGTAGG GGAAGATCAG AAGCAGCATT TAGAACTAAC CCGTGACGTT GCCACACGCT TTAACAATGC CTATGGTGAT GTATTTACTA TTCCTGATCC GTATATCCCT GAAGTAGGCG CGCGTATCAT GAGCCTACAA GATCCGCTGA AAAAGATGTC TAAATCCGAT GATAATCAAA ATAACTTCGT TGGCTTATTG GAAGATCCGA AAAAGATAAG TAAAAAGATT AAACGCGCAG TCACTGACTC GGATGAGCAA GCGCGCATTT ACTTTAATAC CAGCGAAAAA CCTGGTGTGT CGAATTTACT CAGCTTGCTA TCTTGTGCAA CCGGCAAACC GATTGCTGAT TTAGTGCCTG AATATGAAGA TAAGATGTAC GGCCATTTAA AAACAGATGT AGCCGATTCC ATCGTTGCCA TGCTAGAGCC AATCCAAGCT AAATTTACTG AGTTACGTCA GGATCAAACC GAGCTGAACC GTATCATGGC GGCAGGCGCT GAAAAAGCGC AAGTACGAGC CCAGCAAACC ATAGACAAGG TTTATGAAGC AATCGGATTC GTAGCAAGCC CACTTAAACG CTAG
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Protein sequence | MSKPIVLSGC QPSGQLTLGN YVGALRQWVD MQDDNECLYM LVDMHAITVR QDPAALHNAC LDGLALYVAC GIDPSKSTIF MQSHVPQHAQ LAWIMNCYTQ MGELNRMTQF KDKSAKNITN INSGLYTYPA LMAADILLYQ AKQVPVGEDQ KQHLELTRDV ATRFNNAYGD VFTIPDPYIP EVGARIMSLQ DPLKKMSKSD DNQNNFVGLL EDPKKISKKI KRAVTDSDEQ ARIYFNTSEK PGVSNLLSLL SCATGKPIAD LVPEYEDKMY GHLKTDVADS IVAMLEPIQA KFTELRQDQT ELNRIMAAGA EKAQVRAQQT IDKVYEAIGF VASPLKR
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