| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0648 |
|---|
| Symbol | |
|---|
| ID | 4173002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 749183 |
|---|
| End bp | 750232 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638053651 |
|---|
| Product | galactose-1-phosphate uridylyltransferase |
|---|
| Protein accession | YP_660231 |
|---|
| Protein GI | 109896976 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1085] Galactose-1-phosphate uridylyltransferase |
|---|
| TIGRFAM ID | [TIGR00209] galactose-1-phosphate uridylyltransferase, family 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000133641 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAT TCGATCCTGT AGATCACTCT CATCGCCGTC GTAATCCATT GACCAATGAC
TGGGTACTTG TGTCCCCTCA TCGGGCTAAA CGCCCCTGGC AAGGTCAAGT GGAAAAACCG
CAACAAAATG ATAGCGCGGC ACACGATCCC AGTTGTTATC TATGCGCCGG TAATACTCGC
ATCAATGGCG AAGTGAATCC TGAATATAAA GACACCTTCG TTTTCACTAA TGACTTTGCG
GCATTGATGA AAGACACGCC CGCGTCAGAG CAAGAAAATG ACGATTTATT TACGGTAGAA
GCTGCTCGCG GCACCAGTCG TGTTATTTGT TTTTCACCGG CGCACAATAA GTCGCTACCC
GAACTTCCGT TACCTGCCCT TGAGAAAGTC GTACAGACGT GGCGTGACCA GGTGGCTGAG
TTATCCAAGG ATTACACGTG GGTTCAAGTG TTTGAAAACA AAGGCGCGGC CATGGGTTGT
TCTAACCCTC ATCCCCATGG TCAAGTATGG GCGAATGACT TTATACCGAA TGAGGTACGT
AAAGCTGATA TTAACCAACG TGCCTATTTC GACAAGCACA ACAGCTCGCT ATTGCTCGAC
TATGCGCAAA AAGAATCAGC CAGTGGCGAG CGTACAGTGG TTGAAACCGA TCATTGGATT
GCTGTAGTAC CTTATTGGGC TGCTTGGCCT TTCGAAACAC TTCTAATGCC TAAATTCAGT
TGTGCCCGTT TCGACGAAAT GAACGACGCA CAACAGGCAG ACTTAGCCGT AGCCCTTAAA
AAACTCACCA GCCGCTATGA CAATTTATTT CAGTGCTCTT TCCCTTACTC AATGGGTTGG
CACGGCGCGC CACATAACAC TGATGTCACT GAGCATTGGC AGTTGCATGC ACATTTTTAC
CCGCCGCTAT TACGCTCAGC AACAGTGCGT AAGTTTATGG TGGGCTATGA AATGATGGCA
GAGCCACAAC GCGACCTTAC CCCAGAGCAA GCGGCACAAA AGCTACAAGC CTTGAGTGAT
GTTCATTACA ACGAATCAAA CGGAGCCTAA
|
|---|
| Protein sequence | MSKFDPVDHS HRRRNPLTND WVLVSPHRAK RPWQGQVEKP QQNDSAAHDP SCYLCAGNTR
INGEVNPEYK DTFVFTNDFA ALMKDTPASE QENDDLFTVE AARGTSRVIC FSPAHNKSLP
ELPLPALEKV VQTWRDQVAE LSKDYTWVQV FENKGAAMGC SNPHPHGQVW ANDFIPNEVR
KADINQRAYF DKHNSSLLLD YAQKESASGE RTVVETDHWI AVVPYWAAWP FETLLMPKFS
CARFDEMNDA QQADLAVALK KLTSRYDNLF QCSFPYSMGW HGAPHNTDVT EHWQLHAHFY
PPLLRSATVR KFMVGYEMMA EPQRDLTPEQ AAQKLQALSD VHYNESNGA
|
|---|
| |