Gene Patl_0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0633 
Symbol 
ID4173655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp732080 
End bp732784 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content46% 
IMG OID638053636 
Productphosphoglycerate mutase 
Protein accessionYP_660216 
Protein GI109896961 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGTA TTTATTTGAT CCGTCATGGG CAAGCCTCAT TTGGCAAAGA TGACTACGAT 
TGTTTATCTG ACGTTGGTCA TCAACAAGCG ACTCATTTGG GGGCGGATTT AGCCCGAAAA
GGTATCTCTT TCGATAACGT CTTTCGTGGC GACATGTTGC GCCATCAACA AACGGCTGAA
GCCTGTTTGC ACGCCATGCA CGCGCCGGCG CCAATTGTCG CGAATATGAC AGTTAATTCA
GACTGGAACG AATATGATCA CCAAGATATC TTGGCGCAAC TGGATCCAGA CTTTGCTACG
CCAAATGGTG TAAAGCGCTA TCTGTCTCAA CAGGAAAAGC CTAACCACGC ATTGCAAAGC
CTCGTTAATA ACGCGTTTTC CAGATGGATA AGTAATGATT TTGCCGAGCA ATATACTGAG
TCATGGCCCG CTTATCAGAA ACGTATTCAG CAAGCCTTGC AAAGTACAGT TGCACAAGCC
CAAGATTCGA AACACATTGC CGTATTCAGC TCAGGCGGCC CCATTGCATT TTTAAGCCAA
ATGCTCCTCA AGGTGCCTGC AAATAATTTG ATGGGCTTGA ACTGGACATT GGTCAATGCG
GGGGTCACTA AAATCATTGC CAGCAAGCAT GGGCTGGTAT TATCAAGTTT AAATGATCAT
TCCGCGTTTG AGGGCCACAA CCGCCATCTC ATCACGTACA AATAA
 
Protein sequence
MASIYLIRHG QASFGKDDYD CLSDVGHQQA THLGADLARK GISFDNVFRG DMLRHQQTAE 
ACLHAMHAPA PIVANMTVNS DWNEYDHQDI LAQLDPDFAT PNGVKRYLSQ QEKPNHALQS
LVNNAFSRWI SNDFAEQYTE SWPAYQKRIQ QALQSTVAQA QDSKHIAVFS SGGPIAFLSQ
MLLKVPANNL MGLNWTLVNA GVTKIIASKH GLVLSSLNDH SAFEGHNRHL ITYK