| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0632 |
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| Symbol | |
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| ID | 4173654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 731253 |
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| End bp | 732002 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053635 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_660215 |
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| Protein GI | 109896960 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGAA AGAATATCGT TATTACCGGT GCTAGTTCTG GCCTAGGAAA AGGCATGGCC
ATTGAATTTG CTAAAATGGG CCGAAACTTA GGTCTGTGTG CCCGCCGCGT AGAACGTCTA
GACGAACTAA AAACCGAATT ACTGGCGATT AACCCTGATA TCAATGTCTT CATTCGCCCT
TTAGACGTGG ACGATCATGC ACAAGTGTTT GAAGTCATTA AAGGGTTTGC CGCAGATATG
GGCTCCTTAG ACAGAGTAAT AGTTAACGCT GGCATGGGCA AAGGTGCCTC GGTAGGTACG
GGGTATTTTC ATGCCAATAA ACAAACCGCG GTAACTAACT TTGTTTCCGC ACTGGCACAG
TGCGAAGTCA GCATGGAGAT TTTCCGTGAA CAAAATGCGG GTCACTTAGT TACCATTTCA
TCGGTCAGTG CCGTTCGCGG TGCGCGCCGA GCGATGACGG TGTACGCGGC GACTAAAGCC
GCGCTTACCT CCATGACCGA AGGTATTCGC ATCGATGTTA TGAACACCCC CATTAAAGTC
ACGACAATTC ACCCTGGGTT TATTCAAAGT GAGATAAACG AGAAAGTGAA AACGGTGCCG
TTTATCGTCG ATACTGAGAC CGGCTGTAAA GCCATGGTTA AGGCCATTGA AAAAGAAGTC
GATAGCAGCT TTGTGCCAAC GTGGCCTTGG GCACTATTTC GCTACATTGC TCGTATTGCA
CCGCTCAGCG TATTGGCAAA AATGAGTTAG
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| Protein sequence | MTRKNIVITG ASSGLGKGMA IEFAKMGRNL GLCARRVERL DELKTELLAI NPDINVFIRP
LDVDDHAQVF EVIKGFAADM GSLDRVIVNA GMGKGASVGT GYFHANKQTA VTNFVSALAQ
CEVSMEIFRE QNAGHLVTIS SVSAVRGARR AMTVYAATKA ALTSMTEGIR IDVMNTPIKV
TTIHPGFIQS EINEKVKTVP FIVDTETGCK AMVKAIEKEV DSSFVPTWPW ALFRYIARIA
PLSVLAKMS
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