| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0606 |
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| Symbol | |
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| ID | 4174094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 698816 |
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| End bp | 701434 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053609 |
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| Product | phosphoenolpyruvate carboxylase |
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| Protein accession | YP_660189 |
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| Protein GI | 109896934 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00195008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCAAAAA TTCTAGACTC ACAACTCAAA GAAACCGTAC GTAATCTAGG TTCAACGTTA
GGTGACATGA TCCGAGCCCA ATTGGGGGAT GAGTGGCTGC AACGAATAGA AACCATCAGA
CTAGATGGTC GCGAATCATA TAAAGGCGAC AGTGAATGTT CTGACAAACT TAAAGCACTA
TTTAGTGAGC TCGAAGATGA GCAGCTGTTA GTCGTAGGTC GTGCATTTTC TCAATTTCTA
AATTTAGCGA ATATCGCCGA GCAAGAATTT AACAGCGCCA ACCATGATCA AGACTCTATT
CAAGAATTGT TCAATCATTT GGACAAAGAT AACGTATCTG CAGAGACCTT CGAAAAAGCG
GTAAACCAAC TCAGTATTGA ATTGGTATTA ACGGCACATC CTACTGAGGT CACTCGTCGC
ACATTGATCC ACAAACACAG CGAATTAGCA CAATGTTTGC GTCAAATACA TCAAACGAGC
TTATCTGACA TTGAACGAGA TAAAATTCGC ACCAGAATAG CGGATTTGGT GGCACAAGCA
TGGCACACAG AAGAAATTCG CACCGTACGC CCTACCCCTG TAGATGAAGC TCGTTGGGGT
TTTTCGGTTA TCGAAAACTC GTTGTGGGAA GCAGTACCCG ATTTCGTACG TGAGCTAAGC
GCAAAATTTG AAGCGAAATA CAATCTTGCG CTCCCCCTAG ATGCAGCCCC AGTGAAATTA
AGCTCGTGGA TGGGCGGTGA CCGAGACGGT AACCCATTCG TAACATCGAA GGTGACTCAG
CAAGTTCTGT TACTCGCCCG TAAACGCGCA GCGAAACTGT TCGCTCAAGA CGTGGATATG
TTACAAGTAG AGCTGTCGAT GAGTGATTGT GACGACACAA TTCGTTCAAT GGTAGGCGAT
GAACTTGAAC CGTATCGTGC ACTATTACGT CCTTTGCTGG ACACGCTAAC CAATACCAAA
AATGGTATTG CTGAATTTCT AAGCGGTGCG TCAGTAGACG ACAGTAAATG GATTGCCAGC
AAGGATGAGC TGCTGACTCC GCTAATGCTA TGTTACAACT CGTTGCAAGC TTGCGGCATG
AGCGTCATTG CCGATGGGCG CTTGTTAGAC ACCATTCGCC GAGTACATTG TTTTGGAGTG
CATCTACTTA AGTTGGATAT TCGCCAAGAT TCTGAGCGTC ACGCAGACGT ATTCAGTGAG
CTTACCCGCC ACTTGGGCAT GGGCGACTAC GGCAATTGGA GCGAAGAAGA CAAGCAAGCA
TTCTTGTTAA AAGAATTGAG CTCGAAGCGA CCTTTATTTC CAGCCAAATG GCAGCCCTCT
GCCGACGTTC AAGAAGTGAT TGATACTTGT AAAGTGGTCG CACAGCACAG TGAAGAAGGC
TTCGGTATTT ACATTATATC AATGGCGAGT TTACCTTCAG ACGTGCTTAG CGTGCACCTA
TTGTTGCGCG AATTCGGCGT GACATGGCCT ATGCCTGTTG CCCCATTATT CGAAACGCTT
GACGATCTGA ATGCTGCTGC CACTGTTATT GATGCCTTAA TGAACATCGA CTGGTATCGT
GGTTACATTC AAGGTCATCA GTACGTAATG ATAGGTTATT CTGACTCAGC GAAAGACGCT
GGCGCTATGG CTGCAGGTTG GGCTCAGTAC GAGTCGCAAG AAGCCCTTGT TGGGATTGCT
GAAAAGTACG GCGTTGAATT AACGCTGTTT CATGGTCGCG GCGGTACAAT TGGGCGTGGT
GGTTTACCCG CTCATGCAGC GATCCTGTCC CAGCCTCCAG GCTCTTTATC TGGCGGTTTC
CGTGTTACCG AGCAAGGTGA AACCATTCGT TATAAATTTG GCATGCCGCA ACTTGCTCAG
CGCAGTTTAG CTTTGTACGC CAGCGCGATA TTAGAAGCCC TAATTTCGCC GCCGCCAGCG
CCGAAACAAG AATGGCGTGA TTTAATCACC GAAGTGGCTG CAAACGCACG CGACAACTAC
CGCAATACAG TACGTCACGA TGAGAATTTC GTGCCTTATT TCAGAGTCGC CACGCCGGAA
CAAGAACTAG GCAAATTGCC ATTGGGTAGC CGCCCAGCCA AGCGTAAACC TAGCGGCGGG
ATCGAAAGCC TACGTGCTAT ACCTTGGATA TTCGCATGGG CGCAAACACG TTTGGTTTTA
CCGTCGTGGT TAGGTGCAAT GAAAGCGGTT CAAACCGCTA TTGACGCAGG TCATCGCCCA
CTGATCGACG ATATGCTTCA AAACTGGCCG TTCTTTCACT CGCGCTTCTC CATGCTAGAT
ATGGTGTTCG GTAAAGCCGA CCCACGTATT AGCGCTGAAT ATGACAAGCG TTTGGTCCCT
GAAGAACTGC GGCATTTAGG TGATGCCTTG CGTGATGAAC TCAATATGAG TATGAGCTTG
TTACTCGATG TGCTTCAACA AAAAGAAGTC ATGGAGTCAG ACCCGAAAGG TAATGAATCT
ATGAACATCC GTGCAGGTTA CTTACAACCA TTGCATTTTT TACAAATTGA ATTGCTAGAG
CGTATTCGTG CAAAAGGTGA AGAAGCGGAC CCAACGTTAG AGCGCGCCAT GATGGTGACC
ATCGCCGGTA TTGCAGTAGG TATGAGGAAT ACGGGGTAG
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| Protein sequence | MPKILDSQLK ETVRNLGSTL GDMIRAQLGD EWLQRIETIR LDGRESYKGD SECSDKLKAL
FSELEDEQLL VVGRAFSQFL NLANIAEQEF NSANHDQDSI QELFNHLDKD NVSAETFEKA
VNQLSIELVL TAHPTEVTRR TLIHKHSELA QCLRQIHQTS LSDIERDKIR TRIADLVAQA
WHTEEIRTVR PTPVDEARWG FSVIENSLWE AVPDFVRELS AKFEAKYNLA LPLDAAPVKL
SSWMGGDRDG NPFVTSKVTQ QVLLLARKRA AKLFAQDVDM LQVELSMSDC DDTIRSMVGD
ELEPYRALLR PLLDTLTNTK NGIAEFLSGA SVDDSKWIAS KDELLTPLML CYNSLQACGM
SVIADGRLLD TIRRVHCFGV HLLKLDIRQD SERHADVFSE LTRHLGMGDY GNWSEEDKQA
FLLKELSSKR PLFPAKWQPS ADVQEVIDTC KVVAQHSEEG FGIYIISMAS LPSDVLSVHL
LLREFGVTWP MPVAPLFETL DDLNAAATVI DALMNIDWYR GYIQGHQYVM IGYSDSAKDA
GAMAAGWAQY ESQEALVGIA EKYGVELTLF HGRGGTIGRG GLPAHAAILS QPPGSLSGGF
RVTEQGETIR YKFGMPQLAQ RSLALYASAI LEALISPPPA PKQEWRDLIT EVAANARDNY
RNTVRHDENF VPYFRVATPE QELGKLPLGS RPAKRKPSGG IESLRAIPWI FAWAQTRLVL
PSWLGAMKAV QTAIDAGHRP LIDDMLQNWP FFHSRFSMLD MVFGKADPRI SAEYDKRLVP
EELRHLGDAL RDELNMSMSL LLDVLQQKEV MESDPKGNES MNIRAGYLQP LHFLQIELLE
RIRAKGEEAD PTLERAMMVT IAGIAVGMRN TG
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