Gene Patl_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0605 
Symbol 
ID4174093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp697954 
End bp698583 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content48% 
IMG OID638053608 
Producthypothetical protein 
Protein accessionYP_660188 
Protein GI109896933 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.313506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATAA CATCTCCTTA TTTGATCCCC AGCGCACCAG TCACCTTTGA AGAAGAAATA 
AAACGTAGCC GGTTTATCAC CCTACTCTCC CATACACCTA GCGCTGCAGA AGCCAAAGCG 
TTTATCCAAC GAATAAAAAA CGCGCACCCA CAAGCTGGGC ACCATTGTTG GGGCTTTGTG 
GCTGGCCCAC CCGCGGACTC GATGCAGCTA GGTTTTAGTG ATGATGGTGA ACCAAGCGGC 
ACCGCTGGTA AGCCGATACT CGCTCAATTG CAGGGCAGCC ATATAGGTGA GATAACCGCA 
GTGGTGATCC GTTACTCTGG TGGAACGAAG TTGGGTACAG GAGGCTTAGT GAAAGCTTAT 
GGCGGCGGTG TTAAACAAGC TCTGTCGCTG TTGACCACCA AAACACGTGT AGCAACAGCT 
CATATTGCCA TTGAATACGA TTACGCCTTA CAGGGCGTTA TAGACGATTT AACGCGTGAA 
TATGACCTTT GTATTACGTC TTCGAGGTTT ACAGAAGTAG CCTCTATCGT GGTTTCAATA 
GAGGCTATTC AGGTTACAAG CTTATTGAAA AAAGCCTCTT TGTTTGAGAA CACAAAGCTC 
AGAGCACGTC ACCTAGAGCC CAAAGAATAA
 
Protein sequence
MAITSPYLIP SAPVTFEEEI KRSRFITLLS HTPSAAEAKA FIQRIKNAHP QAGHHCWGFV 
AGPPADSMQL GFSDDGEPSG TAGKPILAQL QGSHIGEITA VVIRYSGGTK LGTGGLVKAY 
GGGVKQALSL LTTKTRVATA HIAIEYDYAL QGVIDDLTRE YDLCITSSRF TEVASIVVSI 
EAIQVTSLLK KASLFENTKL RARHLEPKE