Gene Patl_0604 details

Gene Information

• Locus tag: Patl_0604
• ID: 4174092
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 696007
• End bp: 697932
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638053607
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_660187
• Protein GI: 109896932
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.471742
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACAGT TGTCCATAAA GCAAAAAATT ATTTTCACTC TGAGTATCTT CGTATTGTTA 
ACCTCTACAT TAGTAGGCGG TATCAGCATG ATGACCGCTC GCACCACGAT CGAGGATCGT 
GTACTTGGCA CAGAGTTACC CAACATTGTT AAGCGGATCG CAAGTGAAAT TGACGGCAAA 
ATAACAGCCA TGCAAATTAT CGCTACTCAA ATTGCGACAG ATCCCTTTAT TCTGCAATGG 
AACGAGCAAG GGCAATCAGC AGAAGGTGAG AAACTCCTTG TTCAGTTATT GCGAAATACC 
GTGAGTCAGC ACAACTTGAG TGCTGCTTCG TTTGCGGACA AACAGACGAA TCGTTACTGG 
AATCAAGAGG GTTTTCTGCG CACTTTAAAA GACGATACGG CTGATGGTTG GTTTTTTAAA 
TACATCCAAA GTAAACGAGC CGATATGGTC AGCGTTTATC GAGATCCAAA TACGGGTAAA 
ACAGATTTGT TCGTAAACTA TCAGCAAGCC AATGGAAGGG GGTTATCTGG TACCGCTAAG 
TCCTTTAAAG ACGTTGTCGA TTTGCTCGCA AGTTTTAAGT TAGAAGCATC GGGTTTCGTT 
TATTTGGTTG ATGATCAAGG GCTGGTTCGA CTTCATACTG AAACAGGACT GATTAATAAC 
GCCAACCTAG ATGCCTTATA TGGCAATGGG AATGGGACCA GCTTACTAGA AAAAAACGAC 
TTTAATCTAG CCACTGTAAA GATGAAAAAT ACCAAAATGC TCGTCGTAAG CAGTTATATA 
CCCAGCATGA ATTGGTATGT CGTGGCCCAA GTACCGTACA ACGAAATATT CGCTACCTTA 
GACAATGCAG TATGGAATAT TACGCTCTGG TCAATTCTAA TTGCAGCAAT AGCCTGTTTG 
GCCGCGTGGT TCGTCGCTAC CAGCATTACG CGGCCCATCA ATGAACTTGC AGGCGTCTTT 
AAAAAATTAG GAACAGGGAA CGCGGATCTT GCTTATCGCT TACCTGAAAC GGGTCAAAAG 
GAATTAGCAG ATGTTGCAAA GGGCTACAAC GATTTCGTTA ATCAATTAGA TATGACGTTT 
AGTGACGTAA TGCGAAATAG TATAGCGCTT AAAGATGTCG CGCGTTCATT ACAAAATATC 
GCCGGCCAAA CCTTAGAAAG TGCGCAACAA AGCGATGAGC ACACTCAAGA TATATCGATG 
AATCTAAGTC AGGTGAGCAG TGCAGTAAGT GAAGTGGCAA AAAGTGCTGA ATCTGCAACG 
GTGGTGGCGG TGCAAATCAA TTCTGAAGGA GATCAAATAT CTCAGGTTAT CACTAACACC 
CAGCAAGATA TTAATGGATT AGTGACTAAG ATAAACGATG TGGCCGAGGT CATTCGTTCA 
CTGAGCAATA ACACGGACAC CATTGCTAAA GTACTGGAGA ATATTCAAGC TATTTCCGAT 
CAAACGAATC TACTCGCGTT GAATGCCGCT ATTGAGGCGG CGCGAGCGGG AGAGCAAGGT 
AGAGGCTTTG CTGTGGTAGC AGATGAAGTT CGCACGTTAG CGAAACGAAC GGCAGACTCT 
ACTCATGAAG TGCAAGCGAT TATGCAAGAG CTCAAGGTGA CCTCGGCATC AGCAACTAAA 
GAAATCACCT CGATAATTGA GCAATCTCAA GTTACTGCTA GCTCCATAGG AACCGCCCAT 
CAGGTTCTAG AGGCAAATAG TTCACATTTT AATGACATAA CTCAAGCCAA TCGGTCTGTA 
GCTGCGGCGA CAGAAGAGCA GTCCGTTAGT ATCGAGTTGA TAAATCGTAA TATGCAAGAC 
ATCAGAAAGC GCTCTGGGGA GAATATGCAA AAGATTGCTC AGATGGCAGA TGAGTCAGGT 
GGACTAAATG CATTGGCACA ACAGTTGGAC GCGTTAACGC ATCAGTTCAG CAAAGGTAAA 
CGCTAG 

 

Protein sequence

MKQLSIKQKI IFTLSIFVLL TSTLVGGISM MTARTTIEDR VLGTELPNIV KRIASEIDGK 
ITAMQIIATQ IATDPFILQW NEQGQSAEGE KLLVQLLRNT VSQHNLSAAS FADKQTNRYW 
NQEGFLRTLK DDTADGWFFK YIQSKRADMV SVYRDPNTGK TDLFVNYQQA NGRGLSGTAK 
SFKDVVDLLA SFKLEASGFV YLVDDQGLVR LHTETGLINN ANLDALYGNG NGTSLLEKND 
FNLATVKMKN TKMLVVSSYI PSMNWYVVAQ VPYNEIFATL DNAVWNITLW SILIAAIACL 
AAWFVATSIT RPINELAGVF KKLGTGNADL AYRLPETGQK ELADVAKGYN DFVNQLDMTF 
SDVMRNSIAL KDVARSLQNI AGQTLESAQQ SDEHTQDISM NLSQVSSAVS EVAKSAESAT 
VVAVQINSEG DQISQVITNT QQDINGLVTK INDVAEVIRS LSNNTDTIAK VLENIQAISD 
QTNLLALNAA IEAARAGEQG RGFAVVADEV RTLAKRTADS THEVQAIMQE LKVTSASATK 
EITSIIEQSQ VTASSIGTAH QVLEANSSHF NDITQANRSV AAATEEQSVS IELINRNMQD 
IRKRSGENMQ KIAQMADESG GLNALAQQLD ALTHQFSKGK R