Gene Patl_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0593 
Symbol 
ID4173250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp678622 
End bp679194 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content42% 
IMG OID638053596 
ProductNusG antitermination factor 
Protein accessionYP_660176 
Protein GI109896921 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000418183 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAA TTACAGAAAA TGCGGACGTG CCAGAGAAGT CAGATAAAAA GTGGTATGTC 
GTTCAGGCGT TCTCTCAATA TGAAGGGCGT GTGAAAAAGA CACTTCTTGA ATATATTAAA
ATGCACGAAA TGGAAGATTC TTTCGGAGAG ATACTTGTTC CTACCGAAGA AGTCATTGAA
ATGCGCTCTG GCCAACAACG TAAGAGTGAG CGTAAGTTCT TCCCGGGTTA CGTATTAGTA
CAAATGGATA TGAACGAAGA TTCATGGCAT TTAGTCAAAA GTGTTCCTCG TGTGCTTGGT
TTTATCGGTG GTACATCTGA CCGCCCAGCG CCTATCACTA CAAAAGAAGC TAATGCTATT
TTGAATCGCC TTGAAGAAGG TGTTGATAAG CCAAAACCAA AAACATTGTT CGAACCAGGC
GAAGTGGTAC GTGTTACCGA TGGTCCTTTT GCTGACTTTA ATGGTGTGGT TGAAGAAGTC
GATTATGAAA AGAGCCGCTT AAAAGTATCG GTGCTTATTT TCGGTCGCTC AACACCTGTA
GAATTAGAAT TTGGCCAAGT CGAGAAGGGG TAA
 
Protein sequence
MSEITENADV PEKSDKKWYV VQAFSQYEGR VKKTLLEYIK MHEMEDSFGE ILVPTEEVIE 
MRSGQQRKSE RKFFPGYVLV QMDMNEDSWH LVKSVPRVLG FIGGTSDRPA PITTKEANAI
LNRLEEGVDK PKPKTLFEPG EVVRVTDGPF ADFNGVVEEV DYEKSRLKVS VLIFGRSTPV
ELEFGQVEKG