Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0593 |
Symbol | |
ID | 4173250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 678622 |
End bp | 679194 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638053596 |
Product | NusG antitermination factor |
Protein accession | YP_660176 |
Protein GI | 109896921 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000418183 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGAAA TTACAGAAAA TGCGGACGTG CCAGAGAAGT CAGATAAAAA GTGGTATGTC GTTCAGGCGT TCTCTCAATA TGAAGGGCGT GTGAAAAAGA CACTTCTTGA ATATATTAAA ATGCACGAAA TGGAAGATTC TTTCGGAGAG ATACTTGTTC CTACCGAAGA AGTCATTGAA ATGCGCTCTG GCCAACAACG TAAGAGTGAG CGTAAGTTCT TCCCGGGTTA CGTATTAGTA CAAATGGATA TGAACGAAGA TTCATGGCAT TTAGTCAAAA GTGTTCCTCG TGTGCTTGGT TTTATCGGTG GTACATCTGA CCGCCCAGCG CCTATCACTA CAAAAGAAGC TAATGCTATT TTGAATCGCC TTGAAGAAGG TGTTGATAAG CCAAAACCAA AAACATTGTT CGAACCAGGC GAAGTGGTAC GTGTTACCGA TGGTCCTTTT GCTGACTTTA ATGGTGTGGT TGAAGAAGTC GATTATGAAA AGAGCCGCTT AAAAGTATCG GTGCTTATTT TCGGTCGCTC AACACCTGTA GAATTAGAAT TTGGCCAAGT CGAGAAGGGG TAA
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Protein sequence | MSEITENADV PEKSDKKWYV VQAFSQYEGR VKKTLLEYIK MHEMEDSFGE ILVPTEEVIE MRSGQQRKSE RKFFPGYVLV QMDMNEDSWH LVKSVPRVLG FIGGTSDRPA PITTKEANAI LNRLEEGVDK PKPKTLFEPG EVVRVTDGPF ADFNGVVEEV DYEKSRLKVS VLIFGRSTPV ELEFGQVEKG
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