Gene Patl_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0582 
Symbol 
ID4173238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp667007 
End bp667345 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content45% 
IMG OID638053584 
Productalkylphosphonate utilization operon protein PhnA 
Protein accessionYP_660165 
Protein GI109896910 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2824] Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism 
TIGRFAM ID[TIGR00686] alkylphosphonate utilization operon protein PhnA 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGCT TACCAAATTG TACTGCGTGT AACTCTGAAT ACACCTATGA AGATGGAAAT 
ATGTATGTTT GCCCTGAGTG CGGACATGAG TGGGCGCAGG GTGAAGACGC GTCTGAAGAC
GATACGCCAG TTATCCGCGA CTCAAACGGT AATACACTCG TGGACGGTGA TACCGTAACG
GTCATCAAGG ATCTGAAAGT AAAAGGCTCA TCGCTGGTGG TGAAAGTGGG CACTAAAGTG
AAAAATATTC GTCTGGTTGA TGGCGATCAC GACATCGACT GCAAAATTGA CGGTGTTGGT
GCTATGAAAC TTAAGTCTGA GTTTGTGAAA AAAGTTTAA
 
Protein sequence
MSGLPNCTAC NSEYTYEDGN MYVCPECGHE WAQGEDASED DTPVIRDSNG NTLVDGDTVT 
VIKDLKVKGS SLVVKVGTKV KNIRLVDGDH DIDCKIDGVG AMKLKSEFVK KV