| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0574 |
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| Symbol | |
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| ID | 4174021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 660173 |
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| End bp | 661012 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053576 |
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| Product | ApbE-like lipoprotein |
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| Protein accession | YP_660157 |
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| Protein GI | 109896902 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.963363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGTC CATGTGAATT GCTTATTGAA ACCCCGAATC AATTGCTCGC CAATCGCTTA
CTACAAGAAG TTGTCTTGCA AACGAAACGG ATCGAGCAAA AGTACAGTCG CTATATTGTT
GGCAACCTAG TTCATCAGAT AAACAATAGC CATGGAAAAT GGGTCGATAT AGATCAAGAA
ACACATCGAT TGCTCGCCTT CGGGCAAACG TGTTTCGAAC TAAGCGATGG CATGTTTGAT
TTAACGTCTG GCGTACTACG AAAGATATGG GATTTCACCG GGAAAGGTCA ATTTCCACGT
TCGGAGCACG TCAGCGAAGT ATTGCAATAC ATTGGCTGGC AAAATGTGCA ATTTACTCAG
CAACAGATTC GCCTACCCAG AGGGTTCGAG TTAGATTTTG GCGGCATTGG TAAAGAATAT
GCTGTGGATT CAGCGGCCAA ATTGTGTATG CAATTGGCAC CGGATACCTC TGTGTTGGTT
AATTTTGGCG GGGATATTCA AGTTACCCAA CCAAGGCACC ATGAGGCGTA TTGGCAAGTA
GGTATTGAAC GCCCTCACGT CAAGGGTGAT TCAGCTAAAA GCGCGTTAGT GAAGATAGCG
TCCGGTGGGT TAGCCACCAG CGGAGATACA CGGCGCTTTA TTGTCCACAA CGGTGTTCGC
TATAGTCATA TATTGAGCCC CAAAACCGGT TATCCAGTTT CTGGGGCCCC CCGCTCTGTG
ACCGTAGCCA CTGACTTTTG TATTCAATCC GGCATGTTAG CAACCATGGC ATTATTGCAA
GGCACAGAGG CCGAACACTT CTTACAAGCT CAGCAGCAAA AGCATTGGTG TTATTGGTGA
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| Protein sequence | MASPCELLIE TPNQLLANRL LQEVVLQTKR IEQKYSRYIV GNLVHQINNS HGKWVDIDQE
THRLLAFGQT CFELSDGMFD LTSGVLRKIW DFTGKGQFPR SEHVSEVLQY IGWQNVQFTQ
QQIRLPRGFE LDFGGIGKEY AVDSAAKLCM QLAPDTSVLV NFGGDIQVTQ PRHHEAYWQV
GIERPHVKGD SAKSALVKIA SGGLATSGDT RRFIVHNGVR YSHILSPKTG YPVSGAPRSV
TVATDFCIQS GMLATMALLQ GTEAEHFLQA QQQKHWCYW
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