Gene Patl_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0533 
Symbol 
ID4173517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp622532 
End bp623155 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content43% 
IMG OID638053535 
Producturidine kinase 
Protein accessionYP_660116 
Protein GI109896861 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCCC CCCTCGTTAT CGCTATCTCC GGTGCTTCTG GCTCGGGTAA ATCGCTGTTT 
ACTGAAAACT TGCTTAAAGA ATTCTCGGAA GACGGCAAAC ATGTACAAAT ACTTCGTGAA 
GATCATTATT ATCGCGCCCA AGACCATCTA CCCATGGAAG AGCGAGAAAA GAATAATTAC 
GATCATCCCA AAGCGTTTGA ACACGAGTTA TTGGTTGAGC ACTTACAGGC TTTGAAGAAC 
TGGCAGTCAG TTGATTACCC TCACTACTGT TATAAAACTC ACACACGCTT GGCTCAAACC 
GAAAAGCTGA TGTCAGCACC TGTTATCATC ATTGAAGGGA TCATGTTGCT AGCAAATCAA 
GAGCTTCAGC CTTTGTTTGA TATTAAGATT TTCGTAGATA CACCGCTAGA CATTTGCTTA 
TTGCGTCGAA TGAAGCGAGA TATAGCTGAA CGAGGACGCA CGTTAGATTC GGTTGCAAAA 
CAATATGAAT CAACCGTCAA GCCCATGTAT CACCAGTTTA TCGCGCCGAG TCGTTTTACT 
GCTGATGTTA TTGTGACTCA GGGTGGAAAA AACCGTATTG CATTGGATGT CATTAAATCT 
CATATCCAGC AGACGCTACT TTAG
 
Protein sequence
MSAPLVIAIS GASGSGKSLF TENLLKEFSE DGKHVQILRE DHYYRAQDHL PMEEREKNNY 
DHPKAFEHEL LVEHLQALKN WQSVDYPHYC YKTHTRLAQT EKLMSAPVII IEGIMLLANQ 
ELQPLFDIKI FVDTPLDICL LRRMKRDIAE RGRTLDSVAK QYESTVKPMY HQFIAPSRFT 
ADVIVTQGGK NRIALDVIKS HIQQTLL