| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0532 |
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| Symbol | |
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| ID | 4173516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 621278 |
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| End bp | 622486 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053534 |
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| Product | nucleoside transporter |
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| Protein accession | YP_660115 |
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| Protein GI | 109896860 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAGTT TGATTGGCAT AGCTGTTCTG TTCATACTTG CGATTTTGCT CTCAGCGCAT
CGTAAGTCGA TAAATTGGCG CACTGTGGGT GGCGCTTTTG CTATTCAGGC TATTATTGGT
GCTTTGGTTC TGTACTTCCC CCCAGGGAAA GAATTTTTAC TGGGCTTAAC TGTCTATGTA
AAAAATATAA TTGAATATAG CCAACAAGGC ATCGATTTCA TTTTTGGTCA GTTAGGCAAT
AAATCACTTG GCTTTATCTT CGCCTTTAAC GTTCTCCCTG TTATCGTTTT TTTCTCGTCA
TTAATTACCG TGCTTTATCA TCTTGGTGTG ATGTCTTGGA TCATTCGTCT GATCGGCGGG
TTCTTGCAAA TTGCCCTTAA GACAAGTCGT CCAGAGTCCA TGTCGGCTGC TGCGAATATA
TTTGTAGGTC AAACCGAAGC CCCATTAGTC GTTAAGCCTT TTATTCCTCA TATGACACGC
TCAGAGCTGT TTGCCATTAT GGTCGGTGGG CTGGCGTCTA TTGCTGGCTC AGTTATGGCA
GGTTACGCCG GAATGGGTGT TGAAATTAAA TATCTACTTG CGGCTAGCTT TATGGCGGCA
CCGGGCGGCC TGTTGATGGC AAAGATCATC ATGCCTGAAA CCCAAGAATT TAAAAACGAG
TTGACTGAGG TCAACAACGA AGAAGACAAA TACGCTAATA TTTTTGATGC TGCAGCAAGC
GGTGCGGCCT CGGGTATGCA TCTCGCGTTG AATGTGGGCG CCATGTTACT TGCTTTCATT
GCATTAATTG CACTATTAAA TGGCCTTATT GGGTGGGCCG GTGGTCTTGT AGGGGTCGAG
AACCTAAGCT TTGAAGTCAT TCTTGGGTAT GTGTTCCAGC CGCTCGCATG GGCACTTGGG
GTACCTTGGG ATGAAGCCAA TCTTGCCGGT AGTTTTATCG GGCAAAAAAT GGTGGTGAAC
GAATTTGTAG CTTACGTGGA CTTTTTGAAA TACCAAGCTG ACTTATCGCC GGGCACCCAA
GCTATTGTTA TTTTCTCGTT GTGCGGCTTC GCTAACTTTT CATCCATCGC TATTTTAATG
GGTGGCATTG GTGCATTAGC ACCAGGGCGA CGTAAAGAAA TCGCGCAAAT GGGCCTAAAA
GCAGTGCTGG CCGCAACTCT CGCAAACTTA ATGAGTGCCG CCCTAGCTGG CTTGTACCTC
AGCTTATAG
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| Protein sequence | MVSLIGIAVL FILAILLSAH RKSINWRTVG GAFAIQAIIG ALVLYFPPGK EFLLGLTVYV
KNIIEYSQQG IDFIFGQLGN KSLGFIFAFN VLPVIVFFSS LITVLYHLGV MSWIIRLIGG
FLQIALKTSR PESMSAAANI FVGQTEAPLV VKPFIPHMTR SELFAIMVGG LASIAGSVMA
GYAGMGVEIK YLLAASFMAA PGGLLMAKII MPETQEFKNE LTEVNNEEDK YANIFDAAAS
GAASGMHLAL NVGAMLLAFI ALIALLNGLI GWAGGLVGVE NLSFEVILGY VFQPLAWALG
VPWDEANLAG SFIGQKMVVN EFVAYVDFLK YQADLSPGTQ AIVIFSLCGF ANFSSIAILM
GGIGALAPGR RKEIAQMGLK AVLAATLANL MSAALAGLYL SL
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