| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0528 |
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| Symbol | |
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| ID | 4173512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 616438 |
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| End bp | 618273 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053530 |
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| Product | signal-transduction protein |
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| Protein accession | YP_660111 |
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| Protein GI | 109896856 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.766846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCATA TCCCTCAGCA CATCTTAGAG TTTTTGCGCG ATTCCGCTCC CTTTGAGGTG
CTTGATGAGC ATGAAATGAA TAGGTTGGCG CAGTCCATTA CGGTCGCTTA TTTTAGCCAA
GAAGATGTAA CGAATATTCT GAAACAGCAG CAAGGGGGAT TGTTTCTTAT CTGCAGTGGG
CAATATTCAG TTAAGGATTC CGCTGAATCA GAACGCCACG TAAGTGATGG GGATTATTTC
GGCTGTGACA ACTTATGGCA AAAACAGCCC AATAAAATAG CAGTCACTGT CGATAGCCCG
GGGTTAGTGT ATTGCATCCC GAAAAAAAGT TTCGCCCAAT GTGTTGCTAG CCACCCAAGT
ATTGAAGTTT TCTTTCGAAA TTATACCTCT GAACAAATTT ATAGTGACCA TGTAGATGAC
TCAAAATCTA TGTGGCTTTA CAAGCCGATA AGTGAAGTGA TTTCTGACGG GGTTGTGAGC
GAGGATATCA ACAGCTCAAT TTTGCAAGGG GTGCAAGTTA TGTCAAAAAG CGGCGTTTCT
TCTCTTGTAA TCACGGATAA CCAATTACTG GTGGGTATAC TAACTGACCG AGATATACGA
AATCGCGTGG TGGCGCAGCA AACTGATGTG AACCTTGCGG TTAGTGAAAT AATGACGCGA
GACCCAGTGA AAATTAGCGA TCAGCGGACA TTATTCGATG CCTTGTGCGT CATGACCGAG
CACAATGTGC ACCATTTACC CGTCGTGGAC AAAAACAGCG GGGTTCCTCT TGGGATGTTG
ACGGCGAGCG ATATGATACG TCATCAAAGA GGGAATGTGC TTTTCGTTAT TAACGAGTTA
ACAAAAGCGC CGTCTTTGTA CGAATTAACA AGACTTTCAT GGCAACTACC ACATTATTTT
TCGAAACACG CTAAACGTCT CGGCGACTTT GATATTGCCG GCAAGGTATT GTCTCAGGCA
ACGGATATTA TGACGCGAAA GCTCATTGGC TTTTATCAGC AACAGCATGG TGAAGCACCG
ATGGAGTTTT GCTGGCTTGT TTACGGCTCT CAAGCGCGAG AAGACCAGAC CATGGGATCT
GATCAAGACA ACGGATTACT GTTCGCCACA GAGCCGAGCC CTGAGCAATC TGCCTATTTT
GCAGATATGG CTGAGTACGT ATGCAGGGGC CTAGATAAAT GCGGTATTAA ATTGTGCACT
GGAAATATTA TGGCCAGTAA CCCAGCATTG CGTTTGTCAA TAAAACAAGC TGTTCAGCAA
GCGCAAAGTT GGGTGCGGGA GCCGAGCCCA GAAGCTATTT TAAACTGCAA TATATTTCTT
GATGTACGCG CAGTGGCAGG AAATCGGTTT TTGCTTTCCC AATTACATGT GGAACGTAAG
GAGTTACTCA AACAATCGAG ATTTATTGCC GCGCTTACAC GCCACGCAAG TGATGGGCAT
GTCCCGTTAT CTATGTTTCA GAAATTTGTG TATAAAAAAG GATTACCTAA AAAAGACTGC
ATCGATATGA AAAATAGTGG AGTGGCGATC ATCAATAACC TAGTGCGGAT TTACTCCTTA
GCCAATGGCT TAACCATGCC ATCCATTCCT CATCGACTAG AGGGGCTGTT GTCACACGCA
GGGTTATCGA GCAAAGACGT CAAAAATCTG CGTGATATAT GGCTGTTTCT TAATCGCCTA
CGGTGGCGTC ATCAAATTCA AAATAAGGTG ACTGACAACT ATGTTTCGAT CAGCGATTTG
TCGTCTATTG AGAAATATCA ATTGAAAGAG GCAATGCGCG TTATCCGAAG AACACAGCAA
GCCGCTGTGT TTAAATTTGC CGGTGGTTTA GGTTAA
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| Protein sequence | MNHIPQHILE FLRDSAPFEV LDEHEMNRLA QSITVAYFSQ EDVTNILKQQ QGGLFLICSG
QYSVKDSAES ERHVSDGDYF GCDNLWQKQP NKIAVTVDSP GLVYCIPKKS FAQCVASHPS
IEVFFRNYTS EQIYSDHVDD SKSMWLYKPI SEVISDGVVS EDINSSILQG VQVMSKSGVS
SLVITDNQLL VGILTDRDIR NRVVAQQTDV NLAVSEIMTR DPVKISDQRT LFDALCVMTE
HNVHHLPVVD KNSGVPLGML TASDMIRHQR GNVLFVINEL TKAPSLYELT RLSWQLPHYF
SKHAKRLGDF DIAGKVLSQA TDIMTRKLIG FYQQQHGEAP MEFCWLVYGS QAREDQTMGS
DQDNGLLFAT EPSPEQSAYF ADMAEYVCRG LDKCGIKLCT GNIMASNPAL RLSIKQAVQQ
AQSWVREPSP EAILNCNIFL DVRAVAGNRF LLSQLHVERK ELLKQSRFIA ALTRHASDGH
VPLSMFQKFV YKKGLPKKDC IDMKNSGVAI INNLVRIYSL ANGLTMPSIP HRLEGLLSHA
GLSSKDVKNL RDIWLFLNRL RWRHQIQNKV TDNYVSISDL SSIEKYQLKE AMRVIRRTQQ
AAVFKFAGGL G
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