Gene Patl_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0494 
Symbol 
ID4172721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp571808 
End bp572902 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content45% 
IMG OID638053497 
Productadenylate/guanylate cyclase 
Protein accessionYP_660078 
Protein GI109896823 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGAAT TTATCTCTGA GTCCCTACTC GTTGTTTTGC TGGCGTTTTG TGTTGTTTGT 
TTAGTTGTCA TCGCATTTTT ACTGAAAAAG CTTAAAGCGT TAAGCCATGA AAAAATGTCT
GATGTTACCC CAAAGCCTCG CGCGGTTAAT CAGAAGTCTT TTGAAGAATT GCCCACCGAA
CGTTTCGAGC AACGAGCTGA TGAAGCTTTG CGCCTGCGTC ATACCTTTCA AAAATTTGTG
CCAAAACAGT TTGTTGACCA TTTTGCCAAA CATGGGTCCA GCGTGCTTGA ATTAGGCCAC
GCGGTGGAAG ACGATGTAGC GATTTTGTTC TGTGACATTC GTGGCTTCAC AGGTTTATCA
GAAAATATGA GTCCGCAAGA ACTGATGCGT TTTCTGAATT CATATTTCTT ACGTATGAAC
GACCCCATTC ATCTCAATGG CGGCTTTATC GACAAGTTTA TCGGCGATGC CATCATGGCA
TTATTTGATC ACCCTGATGG CTGCGACGAA GACAAAGCCA GAGATGCACT GTGTGCTGCC
CTCGACTTGC GCCAAGCACT GAGTATATAT AATCAACATA GACAAAACAG TGGTTATCCA
TCAATTGAAA TCGGCATAGG CATTCACTTT GGCCCTGTGG TACTTGGCAC CGTTGGCTCT
GATGATCGCA TGGACACCAC CGTAATCGGT GATAGCGTTA ACATCGCTTA TCGTTTGGAG
GCATTAGCCC CTATTTATCA CTGCGATATC GTAGTGAGCG CACAAGCATT GCAACAAGCC
GCACAGCCTG AACGTTTTAA CGCTCGCTTG CTGGATTGGG TTAAAGTAAA AGGGCGAAGC
AATGCCATTG AAATACACGA AGTGATTGCT CACTTACCCA AAGAGCTTCA GCAGCTAAAG
TTAAGTAACA TGGCACTTAT CAAGCAAGGC CTGACGTATC GATTTGAGCA AAACTGGGCA
CAAGCCATTA ATTGCTTTGA ACAAGCTGCC ACGCTCTCAC CAGATGATTA CTTACCTAAA
CTGCACATCA GTCAATGCCA ACAATTAGCC GAGCAAAAAC TACTTGCCGA CTGGGATGGA
ACCGTTCAGC TATAG
 
Protein sequence
MLEFISESLL VVLLAFCVVC LVVIAFLLKK LKALSHEKMS DVTPKPRAVN QKSFEELPTE 
RFEQRADEAL RLRHTFQKFV PKQFVDHFAK HGSSVLELGH AVEDDVAILF CDIRGFTGLS
ENMSPQELMR FLNSYFLRMN DPIHLNGGFI DKFIGDAIMA LFDHPDGCDE DKARDALCAA
LDLRQALSIY NQHRQNSGYP SIEIGIGIHF GPVVLGTVGS DDRMDTTVIG DSVNIAYRLE
ALAPIYHCDI VVSAQALQQA AQPERFNARL LDWVKVKGRS NAIEIHEVIA HLPKELQQLK
LSNMALIKQG LTYRFEQNWA QAINCFEQAA TLSPDDYLPK LHISQCQQLA EQKLLADWDG
TVQL