| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0493 |
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| Symbol | |
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| ID | 4172720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 570525 |
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| End bp | 571445 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053496 |
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| Product | Dyp-type peroxidase family protein |
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| Protein accession | YP_660077 |
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| Protein GI | 109896822 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2837] Predicted iron-dependent peroxidase |
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| TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCACAAC CACAAAAAGG GATTTGTGCT GAAGCAAGCT TGCATGCCCT GTATTTACTG
CTCAATGTGA ACGATGATGA TGATTCAGTC ATGCGCATCA AGATCGCACA AATTGTCGAC
TTATTTGCCC ATTATGATGA AGAGCATTAT GAGGCAATGG TCACCGGCGT TGTTGCCATA
GGCAGTAGCT ATTGGCACGA CGTTTATCCG GGATTAATTC CTGTCGAATT AGCGCCGTTT
CCTGATATGC ACTGCGATGA CCGCAGTGCC CCTGTCGCAC CTTGTGATTT ATTTATTCAA
ATTCGCGCTG ACAGGGCGGA TATTTGCCAT GCCCTTGCCA TGGAAATCAT GCGTTTGCTT
GGCAGCCATG TGGATTTGAT TGAAGATATA CGCGGATTCA GATATTTAGA TGGTCGTGAT
TTAACTGGAT TTATTTACGC CGACGACAAC CCCAAAGGTA TGCATAAGTT AGATATCGCG
TTAGTGGGGG AGCTCGATCC AGACTTTGCT GGTGGCAGTT ACATACATGT GCAAAGGTAC
CGTCACAATA TTGCTAAGTG GGAGCAATTG TCTGCCTATC ATCAAGAATA CATAATGGGC
CGTAAAAAAT CGGATAACAG CCCCCTGAGT GATGCCTTTA AATCACCTCG TAGTCATTAC
GATTGTACCC AGATTACAGA CAATGAAAGC CGTCCTATGC GGATTTTGCG CCAGAGCATG
CCCTATGGAG ATATGCATGT GCAGGGGCTG TTTTTTGTCA GTTGTGCTCG CAGTCCTAAG
CCATTCGAGC ATATGCTACG CAATATGATC ATGAATGATG AAAACGGTGA ATATGACCGC
TTTTTGGATT ATACCAGTGC TGAAACTGGC GCTGCGTTTT TTGCTCCATC GCTTACCTTT
ATTAAGCAGC GCGCAAATTA A
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| Protein sequence | MPQPQKGICA EASLHALYLL LNVNDDDDSV MRIKIAQIVD LFAHYDEEHY EAMVTGVVAI
GSSYWHDVYP GLIPVELAPF PDMHCDDRSA PVAPCDLFIQ IRADRADICH ALAMEIMRLL
GSHVDLIEDI RGFRYLDGRD LTGFIYADDN PKGMHKLDIA LVGELDPDFA GGSYIHVQRY
RHNIAKWEQL SAYHQEYIMG RKKSDNSPLS DAFKSPRSHY DCTQITDNES RPMRILRQSM
PYGDMHVQGL FFVSCARSPK PFEHMLRNMI MNDENGEYDR FLDYTSAETG AAFFAPSLTF
IKQRAN
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