| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0478 |
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| Symbol | rpsQ |
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| ID | 4171821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 552311 |
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| End bp | 552562 |
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| Gene Length | 252 bp |
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| Protein Length | 83 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638053481 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_660062 |
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| Protein GI | 109896807 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.112019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGAAC AATCAAGTCG TACAGTACAA GGTCGTGTGG TCAGCAACAA AATGGATAAA
ACCATTACTG TTGCAGTAGA GCGTAAAGTG AAATCCCCTA TTTATGGTAA GTTCATTAAG
CGTACTACTA AGCTACACGC TCATGACGAG ACTAACCAAT GCAACACAGG CGACGTAGTA
ACAGTACGTG AATGTCGTCC TATGTCTAAG TCCAAAAACT GGATGTTGGT AGATATCGTT
ACTAAAGCTT AA
|
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| Protein sequence | MTEQSSRTVQ GRVVSNKMDK TITVAVERKV KSPIYGKFIK RTTKLHAHDE TNQCNTGDVV
TVRECRPMSK SKNWMLVDIV TKA
|
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| |