| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0475 |
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| Symbol | rpsC |
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| ID | 4171818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 551009 |
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| End bp | 551707 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053478 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_660059 |
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| Protein GI | 109896804 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00134596 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACAGA AGGTACATCC TACAGGCATA CGCCTGGGTA TCAGCAAACC ATGGACATCT
ACCTGGTACG CTAATACTGC AGATTATGCA GATAACTTGT TTAATGATCA TCAGGTACGT
CAGTATCTGA CAAAGGCACT TAAGACTGCT TCTCTTTCTA AGATCGTTAT TGAGCGTCCA
GCGAAAAGCA TCCGTGTGAC TATTCACACT GCTCGTCCTG GCGTTGTAAT CGGTAAGAAA
GGTGAAGACG TTGAGAAGCT ACGTAAGCAT GTATCTAAGT TGGCCGGCGT GCCTGCTCAG
ATTAACATCG CTGAAGTACG CAAGCCTGAA TTAGACGGTC AACTGGTTGC TGACAGCATT
GCTAGTCAGT TAGAGCGTCG TGTAATGTTC CGTCGTGCTA TGAAGCGCGC AGTACAGAAC
GCGATGAGAA TTGGTGCCAA AGGTATTAAA GTTCAAGTAA GTGGCCGTTT AGGCGGTGCT
GAGATTGCGC GTGCCGAGTG GTATCGTGAA GGTCGTGTTC CATTACACAC TTTCCGTGCT
GACATCGACT ATGCAACATC AGAAGCTAAC ACGACTTACG GTATCATTGG CGTGAAGGTC
TGGATCTTCA AAGGTGAAGT ATTGGGCGGA TTGCCTCTTA CGCAAGAGCA ACCAGCTCAG
CCTAAGAAGA AAGGCCGTTC ACCTAAGCGT GAGGGCTAA
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| Protein sequence | MGQKVHPTGI RLGISKPWTS TWYANTADYA DNLFNDHQVR QYLTKALKTA SLSKIVIERP
AKSIRVTIHT ARPGVVIGKK GEDVEKLRKH VSKLAGVPAQ INIAEVRKPE LDGQLVADSI
ASQLERRVMF RRAMKRAVQN AMRIGAKGIK VQVSGRLGGA EIARAEWYRE GRVPLHTFRA
DIDYATSEAN TTYGIIGVKV WIFKGEVLGG LPLTQEQPAQ PKKKGRSPKR EG
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