| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0468 |
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| Symbol | rpsJ |
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| ID | 4171811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 547635 |
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| End bp | 547946 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053471 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_660052 |
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| Protein GI | 109896797 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000173961 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAAATC AAAGAATTCG TATTCGTTTG AAAGCGTTTG ATCACAAGTT GATCGATCAG
TCTACGGCTG AAATCGTTGA AACTGCGAAG CGTACCGGTG CTCAGGTTAG TGGACCTATT
CCTCTACCTA CCCGTAAAGA GCGTTATACA ATACTTACTT CACCTCACGT AAACAAAGAT
GCGCGTGATC AGTATGAAAT TCGTACACAT AAGCGTTTGG TGGATATCAT CGAGCCTACT
GATAAAACAG TAGATGCCTT GATGAGATTG GACTTGGCTG CCGGTGTTGA TGTTCAAATC
AGCCTGGGCT AA
|
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| Protein sequence | MPNQRIRIRL KAFDHKLIDQ STAEIVETAK RTGAQVSGPI PLPTRKERYT ILTSPHVNKD
ARDQYEIRTH KRLVDIIEPT DKTVDALMRL DLAAGVDVQI SLG
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