| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0464 |
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| Symbol | |
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| ID | 4171807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 538040 |
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| End bp | 540127 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053467 |
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| Product | elongation factor G |
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| Protein accession | YP_660048 |
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| Protein GI | 109896793 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000919416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATT TAGCACGTTA CAGAAACATC GGTATTTTCG CCCACGTTGA TGCGGGTAAA
ACTACCACAA CAGAACGAAT TTTGAAGCTT ACCGGTCAAA TACACAAAAC CGGTGAAGTA
CATGATGGTG AATCTACCAC TGACTTCATG GAACAAGAAG CTGAGCGCGG TATTACTATC
CAATCAGCTG CGGTTAGTTG TTTTTGGAAA GACCACCGTT TCAACGTTAT CGATACTCCT
GGGCACGTTG ACTTCACTGT TGAAGTTTAC CGCTCACTTA AAGTACTTGA TGGCGGCATC
GGTGTTTTCT GTGGTTCTGG TGGTGTTGAG CCTCAGTCAG AAACTAACTG GCGTTATGCG
AATGACTCAG AAGTTGCACG TATTATCTTC GTAAACAAAT TGGACCGTAT GGGTGCTGAC
TTCTACCGCG TAGTTGACCA AACCAAAAAA GTACTTGGTG CTAATCCACT CGTTATGGTT
CTACCTATCG GTATCGAGGA TGACTTCGTT GGTGTGGTTG ACCTTCTTAC TCGCAAAGCA
TTCATTTGGG ATGACACTGG TCTTCCTGAA AACTACGAAA TCACAGATGT TCCTGCGGAC
ATGGTTGATA AAGTAGAAGA ATACCGTGAA ATGTTGATCG AAACTGCTGT TGAGCAAGAC
GATGACCTAA TGATGGCTTA CATGGACGGC GAAGAGCCTT CTATGGAAGA CATTAAACGT
TGTATCCGTA AAGGTACGCG TACTATGGAC TTCTTCCCGA CTTACTGTGG TTCTGCATTC
AAAAACAAAG GTGTTCAAAA CATTCTTGAT GCTGTTGTTG ATTACCTACC TAGTCCTACA
GAAGTTGACC CTCAACCTCT TACAGACGAA GAAGGTGAGC CGAATGGTAA GTACGCAATT
GTTTCACCAG ATGAAACATT TAAAGCGTTA GCGTTCAAAA TTACAGATGA CCGTTTTGGT
GCTCTTACTT TCGTACGTAT CTATTCTGGT ACGCTTAAGA AAGGCGACAC CATACTTAAT
GCTGCAACAG GTAAAACTGA ACGTATTGGT CGTATGTGTG AAATGCAAGC CGATGACCGT
AATGAGTTAA CTAGCGCTCA AGCTGGTGAC ATCATCGCAA TCGTTGGTAT GAAGAGTAAC
GTTCAAACAG GTCACACTTT ATGTGATCCT AAAGATCCAA TCATCCTAGA AGCGATGGTA
TTCCCTGAAC CAGTAATCTC TATCTCTGTT ACACCTAAAG ATAAAGGTTC AACTGAGAAG
ATGGGTCTAG CTATCGGTAA AATGGTTGCA GAAGATCCTA CATTCCGTGT TGAAACTGAC
CAAGATTCAG GTGAAACAAT CCTATCTGGT ATGGGCGAGC TTCACTTGGA CATCAAAGTA
GATATTCTTA AGCGTACTTA CGGTGTTGAA TTAGAAGTCG GTGAGCCTCA AGTTGCATAC
CGTGAAACGA TCACTCAAGA AGTTGAAGAT TCTTACACTC ATAAGAAACA ATCTGGTGGT
TCTGGTCAGT TCGGTAAAAT CGATTACCGT ATCAAGCCTG GTGAGCCTAA TAGTGGTTTC
ACATTCAGCT CAGTGGTTGT GGGTGGTAAT GTACCAAAAG AATTCTTCCC TGCTATCGAA
AAAGGTTTTG CAAGCATGAT GGAGTCTGGT GTTCTTGCTG GCTTCCCTGT GTTAGATGTT
GAGGTTGAGC TTTATGACGG TGGATTCCAC GCAGTGGATT CATCAGCAGT TGCATTTGAA
ATCGCTGCTA AAGGCGCATT CCGTCAATCA ATCCCTAAAG CGGGTCCTCA GTTGATTGAA
CCTATCATGA AAGTTGACGT GTTCACGCCA GACGACCATG TTGGTGATGT TATCGGTGAC
TTGAACCGTC GTCGCGGTAT GATCAAAGAT CAAGAAGCAG GCGTTACTGG TGTTCGCGTT
AAGGCTGATA TCCCTCTTTC AGAAATGTTT GGTTATATCG GTTCATTGCG TACAATGACG
TCAGGTCGTG GTCAGTTCTC TATGGAGTTC TCGCACTACT CACCTTGTCC GAACAACGTC
GCTGAAAAAG TAATTGCTGA TACTAAAGAG CGTAACGCTA AGAAGTAA
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| Protein sequence | MKDLARYRNI GIFAHVDAGK TTTTERILKL TGQIHKTGEV HDGESTTDFM EQEAERGITI
QSAAVSCFWK DHRFNVIDTP GHVDFTVEVY RSLKVLDGGI GVFCGSGGVE PQSETNWRYA
NDSEVARIIF VNKLDRMGAD FYRVVDQTKK VLGANPLVMV LPIGIEDDFV GVVDLLTRKA
FIWDDTGLPE NYEITDVPAD MVDKVEEYRE MLIETAVEQD DDLMMAYMDG EEPSMEDIKR
CIRKGTRTMD FFPTYCGSAF KNKGVQNILD AVVDYLPSPT EVDPQPLTDE EGEPNGKYAI
VSPDETFKAL AFKITDDRFG ALTFVRIYSG TLKKGDTILN AATGKTERIG RMCEMQADDR
NELTSAQAGD IIAIVGMKSN VQTGHTLCDP KDPIILEAMV FPEPVISISV TPKDKGSTEK
MGLAIGKMVA EDPTFRVETD QDSGETILSG MGELHLDIKV DILKRTYGVE LEVGEPQVAY
RETITQEVED SYTHKKQSGG SGQFGKIDYR IKPGEPNSGF TFSSVVVGGN VPKEFFPAIE
KGFASMMESG VLAGFPVLDV EVELYDGGFH AVDSSAVAFE IAAKGAFRQS IPKAGPQLIE
PIMKVDVFTP DDHVGDVIGD LNRRRGMIKD QEAGVTGVRV KADIPLSEMF GYIGSLRTMT
SGRGQFSMEF SHYSPCPNNV AEKVIADTKE RNAKK
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