| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0458 |
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| Symbol | |
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| ID | 4173231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 532348 |
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| End bp | 533373 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053461 |
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| Product | ApbE-like lipoprotein |
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| Protein accession | YP_660042 |
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| Protein GI | 109896787 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAGG GTGACAGCGG GAAGGCTAAA TTCCTCGGTT TAATCTTGTG GATATGGCTG
CTATGCAGTT GCAGTCAAGC GCCAACAGAA ACACATTTAG CGGGCCATAC CATGGGCACG
ACTTACAATG TGAAGTTCGT TAATAGAAAT AATGTAAATG AACAAAAATT ACATGACGAC
ATCGATGCTG CATTGGTGAA AGTAAATGAA TTGATGTCGA CTTACGACGC CAATTCAGAA
CTGTCACGAT TCAACCAGTG GAAGAGTGAA GCACCCTTTG CGTTATCTTC AGAAACGTTG
AAGGTGATGC AGGAAGCGAA GCGCTTGGGC GAGTTAAGTC ATGGCGTACT TGATGTGACT
GTAGGGCCAT TGGTTAACCT TTGGGGCTTT GGTCCTGATG CGAAACCTGA GAAACGCCCC
AGTAAACAAA CTGTGGCAGA AGTCAAAGCT CGCATCGGAT TAGATAAATT GACCTTACTT
GATAACGGCG CGCAAAAGTC TGAAATTGAT TTGTATGTTG ACCTGTCTAC TATTGCCAAG
GGCTATGGTG TCGATGTCGT GGCCGAGTTA TTGGATGAAA AGGGTCTGCA TGATTACCTA
GTAGAGGTTG GCGGCGAAAT GCGTGTCTCA GGGCATAAAG CAACTGGCAG AGAATGGCGT
ATAGCTGTTG AAAAACCTGT CTCGGTTGAG CGTGCGGTGC AAGAAATTAT TTCGATAGGA
ACAAACGCAA TTGCAACCTC AGGAGATTAT CGCAACTACT TTGAAGAAGA TGGTGTGCGA
TATTCCCACT TAATAGACCC ACGTACAGGC GCACCTATCA CGCACAATCT AGTCGCGGTG
ACTGTGGTGC ATTCGTCCTC AATGACGGCA GACGGGTTAG CGACAGCGCT GATCGTAATG
GGTAAGGAAG AAGCCTTTAA CGTGGCGTTA CAGAATGATT TAGCGGTATT AATGATCACA
CGAGAAAACG GCGAGTTTAA AGAGTATACT ACGCCAAAAT TTGAACCCTT CATTAATCGC
CAATAG
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| Protein sequence | MIKGDSGKAK FLGLILWIWL LCSCSQAPTE THLAGHTMGT TYNVKFVNRN NVNEQKLHDD
IDAALVKVNE LMSTYDANSE LSRFNQWKSE APFALSSETL KVMQEAKRLG ELSHGVLDVT
VGPLVNLWGF GPDAKPEKRP SKQTVAEVKA RIGLDKLTLL DNGAQKSEID LYVDLSTIAK
GYGVDVVAEL LDEKGLHDYL VEVGGEMRVS GHKATGREWR IAVEKPVSVE RAVQEIISIG
TNAIATSGDY RNYFEEDGVR YSHLIDPRTG APITHNLVAV TVVHSSSMTA DGLATALIVM
GKEEAFNVAL QNDLAVLMIT RENGEFKEYT TPKFEPFINR Q
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