Gene Patl_0434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0434 
Symbol 
ID4173725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp511731 
End bp512324 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content43% 
IMG OID638053437 
Producthypothetical protein 
Protein accessionYP_660018 
Protein GI109896763 
COG category[R] General function prediction only 
COG ID[COG3150] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0244352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACA GTAAACCAGA ACAGGTTGTA ATTTATTTAC ACGGTTTTTT AAGCTCACCT 
CAATCTGTGA AGGCTCAGCA GACTAAAGCG TTTGTAGATG AGCATTACCC AGATATCGTG 
TTTTATATTC CCCAGTTGGA CAATCACCCC AAACCGGCCG CCAAAATGTT AGATGAGCTG 
GTTGCTCGTC ACCCGAATGC AGATTTTGGT TTTATTGGAA GCTCTATGGG CGGTTATTTC 
TCAAGTTACC TGCTTGAACG TTATGGCGGT AAAGCGGTAC TGATTAACCC TGCTGTTCAG 
CCTTACAACC TATTAGCTGA TTACTTGGGG GAACATATCA ACCCTTATAC TAAGAAAAGA 
TTCAGCTTAG ATGAATCCCA TACCCAAGAT TTAACCACCT TTGATACCAA AACATTGGCA 
AGCCCTCAAA ACTACTGGGT GTTATTGCAA ACTGCTGATG AAACCTTAGA CTACCGTCAA 
GCAGAGCAGA AATACATGGG CGCAAAATTA ACCATAGAAG AGGGCGGCGA TCACAGTTTT 
CAGGGTTATG AGCGTTTCCT TGCTGATATT TTTCAGTTTC TGCTGCACGA CTAA
 
Protein sequence
MTDSKPEQVV IYLHGFLSSP QSVKAQQTKA FVDEHYPDIV FYIPQLDNHP KPAAKMLDEL 
VARHPNADFG FIGSSMGGYF SSYLLERYGG KAVLINPAVQ PYNLLADYLG EHINPYTKKR 
FSLDESHTQD LTTFDTKTLA SPQNYWVLLQ TADETLDYRQ AEQKYMGAKL TIEEGGDHSF 
QGYERFLADI FQFLLHD