| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0355 |
|---|
| Symbol | |
|---|
| ID | 4173178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 412575 |
|---|
| End bp | 412970 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638053354 |
|---|
| Product | glyoxalase/bleomycin resistance protein/dioxygenase |
|---|
| Protein accession | YP_659940 |
|---|
| Protein GI | 109896685 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAA GCGTATGTAA CGTAAGTGTA TTGGTCGACG ATTACGATAA AGGCATTGAG
TTTTACACCC AGTCATTGGG TTTCACTTTG CTTGAGGATA TTAAAAACGG CCCAGATTCT
CGCTGGGTGC GGATTGCTCC AAACAATGAT GCTGGCCAAA TAGGTGCCGC TTTAGTGCTG
ATGAAAGCGG CTGTTAACCA GCAGCAATGG GTGGGCAATC AAACAGGTGG TAGTGTGTCG
TTTTTCCTGC AAACGGATGA CTTTCACCGT GATTATCAAA ACATGCTGCA ACGCGAAGTG
GTCTTTTTAG AAGAGCCAAG AGATGAGCCC TACGCCACAG TGGCAATATT CCAAGACTGT
TTTGGCAACA AGTGGGATTT GCTGCAACCT AAGTAA
|
|---|
| Protein sequence | MQQSVCNVSV LVDDYDKGIE FYTQSLGFTL LEDIKNGPDS RWVRIAPNND AGQIGAALVL
MKAAVNQQQW VGNQTGGSVS FFLQTDDFHR DYQNMLQREV VFLEEPRDEP YATVAIFQDC
FGNKWDLLQP K
|
|---|
| |