| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0350 |
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| Symbol | |
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| ID | 4173173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 407392 |
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| End bp | 407778 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053349 |
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| Product | putative endoribonuclease L-PSP |
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| Protein accession | YP_659935 |
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| Protein GI | 109896680 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTAAGT CTGTTATTCA TACTGACAAG GCTCCACAAG CTATTGGTAC TTACAGCCAA
GCGATTAAAT CTGGCACTAC TGTGTATTTG TCTGGGCAAA TCCCTCTTGT GGCGGAAACC
ATGGAAATGA TCTCTGACGA TTTCGCCGAG CAAGCTGAAC AAGTATTTAA AAATGTTCAA
GCCGTTTGCC AAGCAGCAGG TGGTAGCACC AACGATTTGG CTAAAGTGAA TATCTTCTTA
ACGGATTTAT CTAACTTCGC TACTGTGAAC GAAATCATGA GCAAGCATTT CAAGCAACCT
TACCCTGCGC GCGCTGCTAT CGGCGTGAAA GAATTGCCTA AAGGTGCTCA AATTGAAATC
GATGGTGTGA TGGAATTACC TGAGTAA
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| Protein sequence | MSKSVIHTDK APQAIGTYSQ AIKSGTTVYL SGQIPLVAET MEMISDDFAE QAEQVFKNVQ
AVCQAAGGST NDLAKVNIFL TDLSNFATVN EIMSKHFKQP YPARAAIGVK ELPKGAQIEI
DGVMELPE
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