| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0348 |
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| Symbol | rpoZ |
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| ID | 4173171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 404828 |
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| End bp | 405100 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053347 |
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| Product | DNA-directed RNA polymerase subunit omega |
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| Protein accession | YP_659933 |
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| Protein GI | 109896678 |
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| COG category | [K] Transcription |
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| COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
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| TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCGCG TAACAGTTGA AGATGCCGTA GATAAAATTG GCAATCGGTT TGATTTGGTT
TTAGTCGCAG CACGCCGCGC AAGACAACTT GCGATTGAAG GTAAAGTTGC ACATGTATCA
GTAGGTACTG ATAAGCCTAC AGTTGTAGCA TTACGTGAAA TCGAAGAAGG TCACGTAACC
GCATCTACTC TAGATGCAGA AAACTTGCGT GACCAACATG CACAAGACCA AGCTCAGTTT
GAGTCTGTAG CAAATATCCT TCAAGAACAG TAG
|
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| Protein sequence | MARVTVEDAV DKIGNRFDLV LVAARRARQL AIEGKVAHVS VGTDKPTVVA LREIEEGHVT
ASTLDAENLR DQHAQDQAQF ESVANILQEQ
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