Gene Patl_0347 details

Gene Information

• Locus tag: Patl_0347
• Symbol: gmk
• ID: 4173170
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 404076
• End bp: 404723
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638053346
• Product: guanylate kinase
• Protein accession: YP_659932
• Protein GI: 109896677
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0194] Guanylate kinase
• TIGRFAM ID: [TIGR03263] guanylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACAAT CACTCGGAAA TTTATTTATA CTTGCCGCGC CTTCAGGGGC AGGTAAATCT 
AGCTTAATCA AAGCGTTACT GCAAAACCAT GATGCGACAG AAATTCATAA CAATGAAATG 
CAGGTCTCGG TTTCACACAC CACGCGAGCA CCGCGCCCGG GTGAAATAGA CGGTGTACAT 
TATCATTTTG TCAGCCGAAA GGTATTTCAA GAGCTGATCA CTCAAGATGA ATTCTTCGAA 
TGGGCAGAAG TATTTGGCAA TTATTATGGC ACCTCTAAAG TGGTCATTGA GCAAACCTTG 
CGCAAGGGGA TAGATGTGTT TTTGGATATT GATTGGCAAG GCGCGCGCCA AGTCAAAGCA 
CAAATCCCTG ACACCGCGAC GATTTTCGTT GCTCCGCCTT CACGAGAGGA ATTAATGCGC 
CGTTTGACCG AAAGAGGCCA AGACACCCCT GAGGTGATTC AAGATCGTAT GAACAAAGCG 
GTCTCAGAGA TATCGCACTA CCATGAGTTT GATTATATTG TGGTCAACGA CGACTTTACT 
GCTGCATTAG CAGAGCTGGA CGCGATTGTC TCGAGTCGCC GTTTACGCAA AGAAAAGCAG 
GTTATGCGTC ACCAAAGTTT GTTTGAAAAT TTACTGGCAA GCGACTAG 

 

Protein sequence

MPQSLGNLFI LAAPSGAGKS SLIKALLQNH DATEIHNNEM QVSVSHTTRA PRPGEIDGVH 
YHFVSRKVFQ ELITQDEFFE WAEVFGNYYG TSKVVIEQTL RKGIDVFLDI DWQGARQVKA 
QIPDTATIFV APPSREELMR RLTERGQDTP EVIQDRMNKA VSEISHYHEF DYIVVNDDFT 
AALAELDAIV SSRRLRKEKQ VMRHQSLFEN LLASD