| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0291 |
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| Symbol | |
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| ID | 4172924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 338546 |
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| End bp | 339817 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053290 |
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| Product | mandelate racemase/muconate lactonizing-like protein |
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| Protein accession | YP_659877 |
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| Protein GI | 109896622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0398096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGGGCA AATCGTTAGC AGCTCATGCG AAGATGATGA TAAGAGGATG TCAGTTGAAA
ATTACCCAAG TGAAGGTGTT TGTTTGCAGC CCAGGCCGAA ACTTCGTTAC CGTTAAAGTG
ATCACCGACG AGGGGATATT CGGCTTAGGC GATGCAACGC TTAACGGCCG TGAAATGGCG
GTCGTTGCGT ATCTTGAAGA GCATGTTGCG CCTTGTTTAG TTGGTCGAAA TGCCCACGAT
ATTGAAGACA TCTGGCAGTA TTTATACAGA GGTGTTTACT GGCGCAAAGG CGCTGTGAAC
ATGGCAGCTA TTGCTGCGAT TGATATGGCC CTGTGGGATA TCAAAGGCAA AGCCGCAAAT
ATGCCAGTTT ATCAATTACT TGGTGGTAGA AGCCGCCGAG GCGTAACCTT ATATGCCCAT
GCCAGTGGTG AAACGATTGA CGATACCCTA GACAAAACCG CAGAGCATAT TGCCCAAGGC
TTCAAGGCTG TGCGCCTACA ATGCGCAGTG CCAGGGTTGA ATGTGACGTA TGGCGTACTT
GGCGATAAGG CCGATTACTT TGAGTTGCAA GGCAGCAGGC CGTTACCCCC AGAAGAAGAT
TGGTCGACGC AAAAATACTT CAACATGGTA GTGGATTTGT TTAAACAAGC TAGAGAGCGC
TTTGGTAACG ACGTGCATTT ATTACATGAT GTGCACAGCC GCTTGACGCC TATTGAATCT
GCGCGTTTAG GCAAATTACT TGAGCCGTAC AATTTGCTAT TTTTGGAAGA TGCGTCGATC
GCTGAAAACC AAGACAGCTA CAAAATCATA CGCCAACACA CCACCACTCC ACTGGCGATT
GGTGAAACCT ATAACACCAT TTGGGACTGC AAAGACCTGA TTCAAAATCA GCTGATTGAT
TACATTCGTG TAGCAGCGAC CCACGCTGGT GGTATTACTC CCCTTCGCCG CATTGCCGAC
TTCGCCAGTA TTTATAACGT AAAAACCGCC CCTCACGGCG CACCAGACCT CTCTCCTGTG
TGTTTTGCTG CCCACATGCA TTTAAATTTG TGGGCACCCA ATTTTGGTAT TCAAGAATTT
GTTGGTTTTG GCAATGCGCA CTCCAGGCGG ATTTTTAAAC ACACAGTAGA AGTGAAAGAC
GGTTTGGCAA ACGTCAGCGA GGCCCCAGGC CTTGGAATAG ATTTTGACGA ACAAGCCGCG
AAAGAATATC CCTATAAACG CTCGTATTTG CCGGTCAGCA GGTTGGAAGA TGGCACTGTA
TGGAATTGGT AA
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| Protein sequence | MWGKSLAAHA KMMIRGCQLK ITQVKVFVCS PGRNFVTVKV ITDEGIFGLG DATLNGREMA
VVAYLEEHVA PCLVGRNAHD IEDIWQYLYR GVYWRKGAVN MAAIAAIDMA LWDIKGKAAN
MPVYQLLGGR SRRGVTLYAH ASGETIDDTL DKTAEHIAQG FKAVRLQCAV PGLNVTYGVL
GDKADYFELQ GSRPLPPEED WSTQKYFNMV VDLFKQARER FGNDVHLLHD VHSRLTPIES
ARLGKLLEPY NLLFLEDASI AENQDSYKII RQHTTTPLAI GETYNTIWDC KDLIQNQLID
YIRVAATHAG GITPLRRIAD FASIYNVKTA PHGAPDLSPV CFAAHMHLNL WAPNFGIQEF
VGFGNAHSRR IFKHTVEVKD GLANVSEAPG LGIDFDEQAA KEYPYKRSYL PVSRLEDGTV
WNW
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