| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0269 |
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| Symbol | |
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| ID | 4171948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 316735 |
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| End bp | 317028 |
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| Gene Length | 294 bp |
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| Protein Length | 97 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053268 |
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| Product | helix-turn-helix, Fis-type |
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| Protein accession | YP_659855 |
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| Protein GI | 109896600 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG2901] Factor for inversion stimulation Fis, transcriptional activator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00086435 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCGAGC AAAATGTAAC TTCTCCTTTT ACCACTACGG TAACGACTCC TTCACAAACA
CAGGCGCAGA AGCCTTTACG TGACTCTGTA AAACAAGCAG TGAATAAGTA CCTTAAGCAA
CTAGACAACA CAGATATCGA AAATTTGTAC GAACTAGTAA TGGCCGAAGT TGAAGCGCCA
ATGTTAGAAG AAATCATGAC TTTCACCCGC GGAAACCAAA CTCGCGCGTC AATCATGTTA
GGCATCAACC GTGGCACGCT ACGCAAGAAG CTTAAACAGT ACGGCATGAA CTAA
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| Protein sequence | MFEQNVTSPF TTTVTTPSQT QAQKPLRDSV KQAVNKYLKQ LDNTDIENLY ELVMAEVEAP
MLEEIMTFTR GNQTRASIML GINRGTLRKK LKQYGMN
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