Gene Patl_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0267 
Symbol 
ID4171946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp314049 
End bp314855 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content44% 
IMG OID638053266 
Producthypothetical protein 
Protein accessionYP_659853 
Protein GI109896598 
COG category[R] General function prediction only 
COG ID[COG4798] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000450935 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAGC GCGCTACGCA GTTAGTTTGT TCTATTACGT TCTTAGCTTC TTCTTTTGCT 
CAAGCTGATG CCCTTATCGA TGCTCTAGCC GATGAAGGAC GCCCTACCGA ACAACGTTTA
CGTGACGAAT ACCGTCATCC GCAGCAAACT CTTCGCTTCT TTGAAGTTCA GGAAGACATG
GCTGTAGCCG AGATTTCACC TGGTGGTGGT TGGTACAGTA ATATTCTTGC TCCGCTATTA
AAGGAAAAGG GCCAGTTTTA CGCTGCACAC TTTTATGTGG ATGAGAACAC CAACGAGTTT
TATAAAAAAT CTCGTGAACA ATTTGAGCAG AAAATAACTG CATTAAAAAG CTATCAAAAC
GTTAAGGTCA CCACCTTTCA TCCAATGAAA GCCACTGATT TTGCGCCAGC TGAATCCCTT
GACCGCGTGC TCACCTTTCG CAATATTCAT AACTGGTACA TGCAAGACGG TGATGAAGGC
GTAGAAAACG CCTTTAAAGC TTTTTACAAA GCTTTAAAGG TCGGCGGTGT GCTTGGTGTG
GTTGAGCATA GCTTACGCGA ATCACAAAGC AGCGCGTTGC AACAAAGCTC CGGCTACATG
AAGCAGTCAT ATGTTATCGC TCTTGCTGAA AAAGCTGGAT TTACCCTAGC AGGTAAAAGT
GAAATCAACG CCAATAAATT AGATAGCGGC GAACACGAAA AAGGCGTGTG GACCTTACCC
CCGAGCTTAC GTTTAGGCGA GAAGGACGAA GGTAAGTACC TGAAGATTGG CGAGAGCAAT
CGTATGACCT TAAAGTTCGT AAAATAA
 
Protein sequence
MFKRATQLVC SITFLASSFA QADALIDALA DEGRPTEQRL RDEYRHPQQT LRFFEVQEDM 
AVAEISPGGG WYSNILAPLL KEKGQFYAAH FYVDENTNEF YKKSREQFEQ KITALKSYQN
VKVTTFHPMK ATDFAPAESL DRVLTFRNIH NWYMQDGDEG VENAFKAFYK ALKVGGVLGV
VEHSLRESQS SALQQSSGYM KQSYVIALAE KAGFTLAGKS EINANKLDSG EHEKGVWTLP
PSLRLGEKDE GKYLKIGESN RMTLKFVK