| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0239 |
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| Symbol | |
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| ID | 4171726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 281435 |
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| End bp | 282628 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053238 |
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| Product | general secretion pathway protein L |
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| Protein accession | YP_659825 |
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| Protein GI | 109896570 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.824428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGT TAATAGTTAG ATTGGGTTCG AATGATGACG ATGTTATCCA TTGGATTGTC
TGCTCTTCCA ATGAGGATGA CGTCATAGCC AGCGGTGAAC TTCCCGGTGT AGCGCATTTA
TCGTCTTTAA AAGACCGAGC GGGGCAACGT CCCATCACAG CACTGGTACC GACTAGCGAT
GTATTACTCA AATGGGTCAC GCTTCCTAGT AAAGCCGGGC GCAAAGCACT ATCGGCTATC
CCGTTTATGC TTGAGGATGA AATCAGCGGC GATATTGACA GCCAGTTTTT CGCGCTCGGT
GGGCGTAAAG ATAACCAACA AGCAGTTGCT GTGGTGAGTA AAATACGACT GCAAGCGTGG
CGAACTCAAT TGGCTGATGC AGGTTTGCAT TGTGAGCGAA TTGTGCCAGA CATTTTGGCC
GTGCCTGAAC CTACATCTGG CTGGGCAGTG CTCGAATTGG GTGAGCAGTT ACTTATCCGA
CAAGACCAGT GGGCGGGTAT TCAAGGTGAG AAAAACTGGT TGGTTCAGGC CATTAACCAT
CACGCAAAGC AGCAACCAAT TCCCTTGTCG CTGGACAACT TCAGTCGTTT GTCTTCGCAA
GAATTAAATA ACGTGCTGCT GCAAGAGCAG CACGTTGATA TGCCGATGAA AATACTGGCA
AGTGGTTCAC AAACAACGCA GTTCAACTTG CTGCAAGGTG AATTTAAATC GCGCAAAAAG
CAAGGCGGGG AGTTCAAGAA ATGGCGTTTA GCCGCGGTAT TGGCCATTGT CGCGCTGTGC
ACAACGTTGA TTGACAAGGT TGCTTTACAG CAGCAATTAA GTAGCGAAAG AGCGCTGGTT
TCCAGTCAGA TAAAGGCGGA ATTTACGCGA GCCTTCCCAA ACGCAGGGGC TTATCGTGAT
GTTCGTGCAA CTATGCGCGC CAAGTTAGCC GCGCTTGAGC AAGGCACAGG TGGCTCATCT
ATGCTGGTGA TGATGGACCA GCTTGCAAAT GCCTTTGCTA AAAGCCAAGT AAAGCCCTCT
AGCGTAAAGT TCGATGCATC AAGAAGAGAA CTACGTATGC AAGCGATGGC AGCTAACTTC
GAGTCTTTAG AGCTGTTCAA GCGTTTAGCC GAAGCGCAAG GTTTTGAAGT AGAGCAGGGC
GCCATCAATA ACCGCAACGA TCTGGTTTAC GGCTCATTGT TGGTAAGGAG TTAA
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| Protein sequence | MEQLIVRLGS NDDDVIHWIV CSSNEDDVIA SGELPGVAHL SSLKDRAGQR PITALVPTSD
VLLKWVTLPS KAGRKALSAI PFMLEDEISG DIDSQFFALG GRKDNQQAVA VVSKIRLQAW
RTQLADAGLH CERIVPDILA VPEPTSGWAV LELGEQLLIR QDQWAGIQGE KNWLVQAINH
HAKQQPIPLS LDNFSRLSSQ ELNNVLLQEQ HVDMPMKILA SGSQTTQFNL LQGEFKSRKK
QGGEFKKWRL AAVLAIVALC TTLIDKVALQ QQLSSERALV SSQIKAEFTR AFPNAGAYRD
VRATMRAKLA ALEQGTGGSS MLVMMDQLAN AFAKSQVKPS SVKFDASRRE LRMQAMAANF
ESLELFKRLA EAQGFEVEQG AINNRNDLVY GSLLVRS
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