| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0218 |
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| Symbol | |
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| ID | 4171764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 261346 |
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| End bp | 262065 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053217 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_659804 |
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| Protein GI | 109896549 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGATA GCATCCTCAT TGTTGAAGAC GACCTTGATA TAGCCAACCT AATGCGGGTT
AATTTACTCG AACTTGGTGT TGAAATAGAT CATCAAGTCG ACGGCGAAAC TGCGCTACAC
CAAGCACTAA GTAACGAGTA TGACGTTATT TTACTAGACG TCATGCTACC CAACATGAGC
GGCTTAGATA TTTGTCGTAA AATTCGTGAT GAACGCCCGA TGCAAATCAT CATCATGCTG
ACCTCAAAAA ACTCTGAAAC CGATAGGGTA TTGGGATTAG AGTTAGGCGC AGATGATTAC
ATGACAAAGC CGTTCAGCGT GCGTGAGCTA CAAGCCAGGG TGCGTTCACA GTTACGCAAA
GTGCACGCTT TGCGCCAGTC TCACGTACCG TCACAGCAAC CTGATGAAGC GTTAAATACA
GGTGATTTAC GAATAGACCA AAAAACCCAT CAGGTGTTTT TAGCAGAGCA AGAACTGGTA
CTAACCGCCA CCGAGTTTGA ACTACTGCAT CATCTCGCCA GCCACCCTGG CCAAGTGTTC
AGCCGAAGCC AATTATTAGA ATCGGTATGG GGTTATCACC ACAGCGGCTA TGAGCATACC
GTCAACTCTC ATATCAATCG ACTGCGGGCC AAGCTGGAAA ACGATGCCAC CTCTCCTAAA
ATTGTGCAAA CCGTCTGGGG CGTGGGCTAC AAATTTAATC CTCAAGGGGT ATCAGGCTAA
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| Protein sequence | MTDSILIVED DLDIANLMRV NLLELGVEID HQVDGETALH QALSNEYDVI LLDVMLPNMS
GLDICRKIRD ERPMQIIIML TSKNSETDRV LGLELGADDY MTKPFSVREL QARVRSQLRK
VHALRQSHVP SQQPDEALNT GDLRIDQKTH QVFLAEQELV LTATEFELLH HLASHPGQVF
SRSQLLESVW GYHHSGYEHT VNSHINRLRA KLENDATSPK IVQTVWGVGY KFNPQGVSG
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