| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0209 |
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| Symbol | |
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| ID | 4171755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 252198 |
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| End bp | 252932 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053208 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_659795 |
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| Protein GI | 109896540 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.665383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGATT CAATTCAAGG TAAAGTAGCA CTCGTCACAG GCGCAAATCG CGGAATTGGT
AAAGCAATCG TCGATTCACT TATCGAAAAT GGGGCAACTA AGGTTTATTT AGCGGTACGC
AACCCAGAAT CAACCAAAGA CATCGAAGCG CAATACGCTG ATAAAGTTGT CACATTGACT
GCCGATGTAG CCGATACCGC ATCAATTCAG CGTTTGGCTA CTCAAGCCAG CGACGTTGAA
ATTTTGGTTA ATAACGCCGG TATTATGCAC GTGACTTCAC CTCTGGCTGA AAATGCAGAA
GAGTCATTGA TGGAGCAAAT TAACGTGAAC GTGTTTGGTT TGATGCGCGT TGCCAATGCA
TTCGCTGAAA CACTAGAGCG CAATAAAGGC GTATTGGTTC AGTTGAATTC TATCGCATCA
ATCAAAACCT TTGGAGACAT TGCCACTTAT TGTGCATCTA AAGCAGCTGC GTATTCGATC
ACCCAAGGCT TAAAAGACAA GTGGGCTGAT AAAGGTATTC GTGTATTAAG CGTACACCCA
GGGCCAATTG GTACAGAAAT GGGGGATTCA GCAGGCTTCG AAGGTGCGCC TGATGCAACT
GTAGTAGCAC AAGCCATTGT TGCTGCACTT GAAAGCGGTG ACTTCCACTC GTTCCCTGAC
CCAGTGGCGA AGCAGCTTGA AGCAGCCTAC CAAAGTTATT CCGATGCGAT TATCACCAGT
GACTTATCTT TATAA
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| Protein sequence | MTDSIQGKVA LVTGANRGIG KAIVDSLIEN GATKVYLAVR NPESTKDIEA QYADKVVTLT
ADVADTASIQ RLATQASDVE ILVNNAGIMH VTSPLAENAE ESLMEQINVN VFGLMRVANA
FAETLERNKG VLVQLNSIAS IKTFGDIATY CASKAAAYSI TQGLKDKWAD KGIRVLSVHP
GPIGTEMGDS AGFEGAPDAT VVAQAIVAAL ESGDFHSFPD PVAKQLEAAY QSYSDAIITS
DLSL
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