| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0204 |
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| Symbol | |
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| ID | 4171750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 246371 |
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| End bp | 247648 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053203 |
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| Product | major facilitator transporter |
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| Protein accession | YP_659790 |
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| Protein GI | 109896535 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACCT TGCTACAGTC TATGTTTTCC TTGTTGTTTT CAGCCGCTAT TTTGCTCGTT
GGCCATGGCC TGCAACTTAC AATCGTGCCT CTTTATGCAA TAAGTTTAGG GTGGGAGCCG
GATTTAATTG GTTATATTGG CTCAAGCTAC TTTCTTGGTT TTGTGCTGGG TTGTTTAACG
GTTCCCCGTC TAGTAGCCCG GGTCGGACAT ATACGGGTGT TTACCGTACT AATTGCACTT
TTTACGGCTT CACTGCTGTT TATTGGTTTA GTTGATCATT TTGCACTTTG GCTCATTGCC
CGCTGTCTTA TTGGCTGGGG CATTGCGGGC ATTTATATGG TCATTGAAAG CTGGCTTAAT
GATAAGACGA GTATCGAGCA CCGAGGTAGC GTACTTTCTG TGTATACCGT GATCTCGCTT
TCAGCTATCT GCGTGGGGCA GTTATTGGTG GGCTTTGAGC TTGGTTATGC TGGCTTATTT
ATGTTGGCGG CTGCATTACT GGTATTGGGT ATTGTACCCG TGGGGCTAAC TAGGCGGGCT
GCTCCGCAGC CTATTCCGGC TGTCAGCTTC AGCTTTAGGC GCTTATTTGC TGTATCGCAA
GTGGCCATGG TGGGAGCGTT TTTTGGTGGG CTAGTGACCG GTGGTTTTTG GGCGTTAGGG
CCAGTGATAG CGGATGCTAA TCAGTTGAGT GCAGGGCAAG TGGGTGTGTT TATGGCGGTG
ACGATATTAG GCGGCACAGC ATTGCAATTG CCCGTCGGTC GCTTATCTGA CCGGATAGAC
AGGCGCTATG TGATAACCGG TTTGGCCGTT GTTGCGGTAT TAACCAGTAT TGCAGCTATT
ATGCTTGATA GCCGCACGCC TGAAGTGATT TATGTGACCA TGTTTTTGTT AGGCGGTTTG
AGCTTTCCGC TTTATTCCCT GTGCTTAGCT CATGCCAATG ACAATACAGA CCTATCCATT
ATGGAAGTGG GCAGTGGGGT GCTGATGATG AATAGCGTCG GCAGTATTCT TGGGCCCCTT
ACTGTTTCTT TTTTGTTGGG GTATACCCAT ATGGCACTGT TTGTAGTGTC GGGTGTGGCG
CTGTCAATTT TGGCTTGCTG GACCTTATAT CGTATTCGCT TCCACGATGT CGCGCGAGAG
CATTATGAGC CGTTTGTAAA TATGCGAAAC ACCACTCAAG AAGTGGTCGA AATGGGCTTA
GAAAGTGAAG AGCCTGAAGA GCCATTGAAT ACGAAAGTCG AGACGATAGA GACAGACGAG
TCGCTCAGCA AGACATGA
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| Protein sequence | MPTLLQSMFS LLFSAAILLV GHGLQLTIVP LYAISLGWEP DLIGYIGSSY FLGFVLGCLT
VPRLVARVGH IRVFTVLIAL FTASLLFIGL VDHFALWLIA RCLIGWGIAG IYMVIESWLN
DKTSIEHRGS VLSVYTVISL SAICVGQLLV GFELGYAGLF MLAAALLVLG IVPVGLTRRA
APQPIPAVSF SFRRLFAVSQ VAMVGAFFGG LVTGGFWALG PVIADANQLS AGQVGVFMAV
TILGGTALQL PVGRLSDRID RRYVITGLAV VAVLTSIAAI MLDSRTPEVI YVTMFLLGGL
SFPLYSLCLA HANDNTDLSI MEVGSGVLMM NSVGSILGPL TVSFLLGYTH MALFVVSGVA
LSILACWTLY RIRFHDVARE HYEPFVNMRN TTQEVVEMGL ESEEPEEPLN TKVETIETDE
SLSKT
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