| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0201 |
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| Symbol | fadB |
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| ID | 4171747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 240399 |
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| End bp | 242558 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053200 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_659787 |
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| Protein GI | 109896532 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.282982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATATG AAGGCAAAAG CCTCAACGTA ACGCTGTTGC CAAACGGCAT TGCAGAGCTT
GTATTCGATG CTCAAGGTTC GGTGAATAAA TTCGATCGCC AAACGGTTAG CGAGCTTGAC
GAAGCGACTC AAGCCCTTAA AAGTCAGTCA GATGTAAAAG GGGTCTTGGT GCGCTCGAAT
AAGTCGACCT TTATCGTGGG TGCTGACATT ACTGAATTTA CTGGCTTATT CGATATGCCT
GCTGAAGAAG TATTAACTTG GGTAGCGAAA ACGTCTCAGG TGTTCGATAG ATTCGAAGAC
TTACCTTTCC CGACGATTTC GGCTATTAAT GGCTTTGCGC TAGGTGGGGG TTGTGAAATG
ACGTTAGCCT GTGACCTGCG TGTTGCAGAC ACCACAGCAG CCATTGGCTT GCCTGAAGTG
AAATTGGGCC TTATGCCTGG TTTTGGTGGC ACAGTACGTT TACCTCGCTT AATCGGCGCT
GATAATGCGC TAGAGTGGAT GACCACAGGC CGTGACCGCA AAGCGGCCAA AGCGCTAGCT
GAAGGCGCAG TTGATGCCGT AGTTGCGCCT GAAAAATTGC GTGACGCTGC CCTTAGCATG
TTGCAAGACG CTATCGACGG GAAATTCGGT TGGGAAGCAC GTCGCGCCCA AAAGAAAGCG
CCTCTTAAAC TGAACAAAAA TGAATCCATG ATGAGCTTCT CAACAGCCAA AGCCATGGTA
TTCGCCCAAG CGGGTAAGCA TTACCCAGCA CCTCATGCCA TGGTTGATAC CGTTGCTAAC
GCAGCCCGTT TAGACCGCGC TGGTGCATTA GAGCTGGAAA ACCAAGGATT CACCAAACTA
GCGAAAAGCG ATGCAGCGAA GGCCCAAGTG GGTATCTTCC TTGCGGATCA GTTAGTGAAA
AGCAAAGGTA AAAAACAAGC CAAAGCCTCA ACCAAAGACG TTAAGCAAAC GGCCGTATTA
GGTGCAGGTA TCATGGGCGG CGGTATTGCA TACCAGTCAG CTGTGAAAGG CACGCCGGTT
ATCATGAAAG ACATTAACCA GGACGCATTG GATCTTGGTT TGAATGAAGC GGCGAAAATT
TTAGGTAAAG GTATGCAGCG CGGTAAAGTG ACCCCTGCTG TTATGTCCAA CACTTTGAAT
AACATCGTAC CGACCCTTGA ATACTCAGCG ATAAAAGACG TTGATTTGGT TATTGAAGCG
GTTGTTGAGA ACCCGAAAGT CAAAGGTATA GTGCTTAAAG AGACAGAGCA AAATGTGTCT
GATGACACAG TGATTTGTTC TAACACTTCA ACGATTTCAA TTAACCAATT AGCAGAGAGC
CTAGAAAAGC CTGAGCGCTT CTGCGGCATG CACTTCTTTA ACCCAGTGCA CAAAATGCCA
TTAGTTGAGA TCATTCGCGG TGAAAAAACC ACTGATGCGA CCATTGCCAC TGTGGTTGCA
GCCACCCTGA AAATGGGTAA AACCCCGATT GTGGTTAACG ATTGCCCTGG TTTCTTGGTA
AACCGAGTGT TGTTCCCTTA CTTCGCGGGC TTTAGCAAAT TGGTTATGGA CGGCGCTGAC
TTTGTAGCAG TAGACAAAGT CATGGAGAAA ATCTTCGGTT GGCCTATGGG CCCAGCTTAT
TTACTTGACG TAGTAGGCAT GGACACCGCC GATCACGCAT CAAGCGTCAT GGCCGATGGC
ATTCCAGAGC GTATGCAGAA AATTGACAAC GATCCGGTTA CCTTGTTGTA CAAATCTGAG
CGTTTAGGGC AGAAAAACGG CAAAGGTTTC TACAACTTCA GCCTAGACAA GCGCGGTCGC
CCAGCGAAGA AAGCCGCTGA TGAAGCGTAC GAATTGTTTG CACCACATTG CGCCGACAAG
CGTGACTTCG ACGCGGATGA AATCATTGCA CGAGTCATGA TCCCAATGGC AAACGAAGCG
ATTCGTTGTT TAGAGGAAGG CATAGTAGGC AGTGCAGCAG AAGCTGACAT GGCCTTGTTG
TACGGCTTGG GCTTCCCTCC CTTTAGAGGC GGGGTGTTCC GTTACATCGA AACCATGGGC
TTGGCTAACT TTGTAGCTCT AGCCGACAAA TACGCGGATT TAGGTCCGAT TTATCAGATT
TCTGACGGCG TGCGCGAAAT GGCCGCTTCA GGTAAATCTT ATTTTTCTCA ATCAGCCTAA
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| Protein sequence | MIYEGKSLNV TLLPNGIAEL VFDAQGSVNK FDRQTVSELD EATQALKSQS DVKGVLVRSN
KSTFIVGADI TEFTGLFDMP AEEVLTWVAK TSQVFDRFED LPFPTISAIN GFALGGGCEM
TLACDLRVAD TTAAIGLPEV KLGLMPGFGG TVRLPRLIGA DNALEWMTTG RDRKAAKALA
EGAVDAVVAP EKLRDAALSM LQDAIDGKFG WEARRAQKKA PLKLNKNESM MSFSTAKAMV
FAQAGKHYPA PHAMVDTVAN AARLDRAGAL ELENQGFTKL AKSDAAKAQV GIFLADQLVK
SKGKKQAKAS TKDVKQTAVL GAGIMGGGIA YQSAVKGTPV IMKDINQDAL DLGLNEAAKI
LGKGMQRGKV TPAVMSNTLN NIVPTLEYSA IKDVDLVIEA VVENPKVKGI VLKETEQNVS
DDTVICSNTS TISINQLAES LEKPERFCGM HFFNPVHKMP LVEIIRGEKT TDATIATVVA
ATLKMGKTPI VVNDCPGFLV NRVLFPYFAG FSKLVMDGAD FVAVDKVMEK IFGWPMGPAY
LLDVVGMDTA DHASSVMADG IPERMQKIDN DPVTLLYKSE RLGQKNGKGF YNFSLDKRGR
PAKKAADEAY ELFAPHCADK RDFDADEIIA RVMIPMANEA IRCLEEGIVG SAAEADMALL
YGLGFPPFRG GVFRYIETMG LANFVALADK YADLGPIYQI SDGVREMAAS GKSYFSQSA
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