| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0191 |
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| Symbol | |
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| ID | 4171737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 226817 |
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| End bp | 229252 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053190 |
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| Product | Ig-like, group 1 |
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| Protein accession | YP_659777 |
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| Protein GI | 109896522 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000536098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAC GGTTACCGAT GTACGTAGTG TGGTTAGCGA TTTTTACGCT AACCAGTTGT
GGTGGCGGAG TCTCTGGGGA AAACGGCGAC GACCCATTTG GCTCTGGAGG CAATTCAGGC
GGCGACACAT CTAGTTTTAC CTTGGCGGTA TCAACCTATG ATGAACAATG CTCCACATCC
ACTCAAAGCT TTACCTCAGG CCAAGTAGCC TGCGTACAAG CCACTTTGAT GCAAAACGGT
AACCCTGTTG AAGGTGAAAT TATTACCTTT TCTGGCACGC TTGGTACATT TTCCAGTACG
ACGAAACTGA CTGATAGCCA AGGTGTCGCA CAAATAGCGA TTTCCAGTGA GAACAGTGAA
GTAGGCGCAG CTGTGTTAAC CGCTACCTTT GATGACAGCA CGAGCAGCGA AAATTACGAA
TATTTAAGTG CTGATACCTT AACCGGCCAA TCTGCCGTGG TTAACTTAGC GTTGCTTAAC
AGTGGTCAGG TAGTCAATCG TTTTCAGGCA GGTACTGACA TTCAGCTGCA ATCACAAATT
CTCGATGAAA ACGATGTGCC AATCCCAAGT GTTATCGTTA CCTTTAGTGC ACAGCGCGGC
ACATTAAACA CCGATTCAGC GCTGACCGAT AACAACGGCG TAGCGCAAGT CACCCTTTCG
GCTGAAGATA GCGACATTGG TGCAGGTGTA GCAACAGCCA CCGCTGTGGT TAACGATGTC
GATTTAGCGT CGTCGTTTAA TTACGAAATA CAAGCTGCAG GCGCCATCTC AGAACAGATT
ATCCGTTTAG GTTACTTTGA TGACAACGGC GTATTTATTG AAGGTCAACT AGGAGTCAGC
ACACGTAATA ATGCCGGTGA CGTGGAAATA AGTGCCGGTG GTACTTTGGG TGTTTCTATC
GCGCTGGTCG ATGAAAATGA CCAACGTATT TTAACCCAAA CCCCTGTTAC CTTTAGCTCG
AACTGTGTCA CTGACGGTTT CGCCACAATC GACACGCTAG TTAACACGAT AAACGGCGTG
GCTAACGCCA CGTTTGAAGA CCAAAGCTGC GCAGGTGGAG ACGGTAACAC CGATTCTATT
GTTGCATCTG TGGTAGTGAA TAACGCAACC CTTAGTGTTT CTCAGGCGAT TTCAATACAA
GCAGAGTCCA TTGGCTCATT GGCTTTTGTA TCGGCTGAAC CCAGCTCATT AGTGCTTCGC
GGCACGGGAG GTCAAAACAG CTCTACGGTT TCAACTTTGG TATTTCAAGT AAATGGTGCG
CTGGGTAATC CACTAGCGCA ACAAGCAGTG TCGTTTAGCT TAAACACGCA AACTGGCGGT
TTAACACTCT CTTCGGCTAC TGGCCTCACC AACTCGCAGG GTCAAGTGAG CACGCGCGTA
ACTGCGGGCG ACGTACCAAC ATCGGTGCGA GTAACCGCCG AAGTAGAAAC TGAATCAGGC
GAGACTATCA TCACCCAGTC TGACCTATTG TCGGTTAACA CGGGCTTACC TGACCAAAAC
AGCATGACCA TTTCCGCTGA TAACCTCAAC CCAGAAGCGT TTGATATAAA CGAGCAAGAA
GTGAATCTAG TGGTACGTTT GGCAGATACT TTCAACAATC CGGTGCCTGA TGGTACCGCA
GTCAGCTTTA CCACTGAGGG TGGCTCTATC GACGGCAGTT GCACTACAGT GTCCGGCGCA
TGCGCTGTAA CCTGGTTGAG CGCGAATCCT AAGGTGCCTG ACCACCGTAT CACTATTTTA
GCGACCGCTA TAGGCCATGA AACCTTATTT GATAGCAACG GTAATAATTT CTACGATGAT
GACGATGGTG CAGGTTTTAA TGACAACACG GACAATGGCT TGTCGACCAG TCTGTATGGG
CAAACCGGCT TTGTGGACAT CAGTGAAGCC TGGCGCGATG ACAACGAAAA TGGCATCCGC
GATGCGGGTG AGATATTTCT TGATTACAAC GCCAACGGTA GCTTTGATTC AGCCGACAAC
CTCTTTAACG GCCCTCAATG TTCAGGCAGC AGTTGCGGCA CGGGTGATGC GAATACCATG
CATGTGCGCC GCGCCTTAGT GTTGGTCACA TCAAGCTCCG CAGCGCAAAT CGATATTATT
GATAACAGCG CCGCCGTCAT TGCCAGCAAC TATCAAACAT CAACAGCGGC AACGGCTATA
CCGCGCGACA CCAGCCAAAC CTTTACGGTT GTTTTTGCAG ATACCGCGCG CCAGCCTATA
GCGAGCGGCT CCACGGTTGT TGTCAATTCA AGTGCGGGGC AACTCAATGG TCAAACAAAT
TTAACCATGC CCAGCACCTC GGTTAATGCG GCATCGCAAG CGATCTTCAC CCTAGAGAAT
GATGTATCTG AAGCAACACA AGCTACATTG AGCGTAACGA TCACCTCCCC TAGCGGCCTT
GAATCTACGA CCAACACGAT AGTGACGTTG AATTAA
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| Protein sequence | MSKRLPMYVV WLAIFTLTSC GGGVSGENGD DPFGSGGNSG GDTSSFTLAV STYDEQCSTS
TQSFTSGQVA CVQATLMQNG NPVEGEIITF SGTLGTFSST TKLTDSQGVA QIAISSENSE
VGAAVLTATF DDSTSSENYE YLSADTLTGQ SAVVNLALLN SGQVVNRFQA GTDIQLQSQI
LDENDVPIPS VIVTFSAQRG TLNTDSALTD NNGVAQVTLS AEDSDIGAGV ATATAVVNDV
DLASSFNYEI QAAGAISEQI IRLGYFDDNG VFIEGQLGVS TRNNAGDVEI SAGGTLGVSI
ALVDENDQRI LTQTPVTFSS NCVTDGFATI DTLVNTINGV ANATFEDQSC AGGDGNTDSI
VASVVVNNAT LSVSQAISIQ AESIGSLAFV SAEPSSLVLR GTGGQNSSTV STLVFQVNGA
LGNPLAQQAV SFSLNTQTGG LTLSSATGLT NSQGQVSTRV TAGDVPTSVR VTAEVETESG
ETIITQSDLL SVNTGLPDQN SMTISADNLN PEAFDINEQE VNLVVRLADT FNNPVPDGTA
VSFTTEGGSI DGSCTTVSGA CAVTWLSANP KVPDHRITIL ATAIGHETLF DSNGNNFYDD
DDGAGFNDNT DNGLSTSLYG QTGFVDISEA WRDDNENGIR DAGEIFLDYN ANGSFDSADN
LFNGPQCSGS SCGTGDANTM HVRRALVLVT SSSAAQIDII DNSAAVIASN YQTSTAATAI
PRDTSQTFTV VFADTARQPI ASGSTVVVNS SAGQLNGQTN LTMPSTSVNA ASQAIFTLEN
DVSEATQATL SVTITSPSGL ESTTNTIVTL N
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