| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0190 |
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| Symbol | |
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| ID | 4171736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 225275 |
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| End bp | 226717 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053189 |
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| Product | peptidase U62, modulator of DNA gyrase |
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| Protein accession | YP_659776 |
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| Protein GI | 109896521 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.498345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTAATC TGGTTGAACA AAACCTGCTT ACTGCCGCTA ACCTCGACAG AGACCATCTT
GCAAACGCGT TAGATGCCAT TTATCAACAT GATAATGATT TTGCTGATCT GTATTTTCAG
GCCAGCCAGC ACGAAACGTG GGTGCTCGAA GACGGCATCA TTAAAGATGG CAGCTATAAC
GTCGAGCGCG GTGTAGGTGT GCGTGCTGTT AGTGGCGAAA AAACCGGGTT TGCTTATTCT
GATGACATCA ACCCAGAAGC GTTGATGCAA GCGGCAAAAG CCTCGCGCAA CATTGCAAGT
GCGGGGGGCA AGCACAAAGT GACAGGCCTT AAAAACAGCA AGGTTGACCC TAAGTACCAT
GCTGACAATC CTATTTTAGG TATGCAAGAC GAAGAAAAAA TAGCCCTTTT ACGTGCGGTT
GATAACTACA TTCGCCAGCA AGAAAGCGCA CTAAGCCAAG TGGTTGTGAG CATCAGTGGT
GTTTACGAAG AAGTGTTAAT TGCTGCTACC GACGGTACGT TTTGCACTGA TATTCGCCCA
TTAGTACGTT TGAACTGTTC CGTGTTAATG GAAAAAGACG CTCGTCGCGA GCGTGGTAGC
TCAGGCGCGG GTGGCCGTTA TGCCTATGAA TATTTCCTAA GCCAAGCTGA TGGGCGCCCA
CTTTACGAAC AAATTGCTGA CGAAGCCATT CATATGGCGC GGGTAAACAT GCGCGCAGTG
GCCGCACCTG CAGGTCAAAT GCCGGTGGTG TTAGGCAGTG GCTGGCCAGG AGTATTATTA
CATGAAGCAG TAGGGCATGG GCTTGAAGGA GATTTTAACC GCAAAGGCGC ATCGACATTT
AGCGGGCGCA TGGGGGAGCA AGTTGCTTCA GCAGGTTGCA CCATAGTGGA CGATGGCACA
TTGGCTAATC GCCGTGGTTC GTTGTCGGTC GATGATGAAG GCACCCCAAG CCAGTACAAT
GTATTGATCA AAGACGGCAT TCTGACTGGC TATATGCAAG ATAAACTCAA TGCGCGTTTG
ATGGGTGTTA AGCCTACTGG TAACGGTCGC CGTGAGTCAT ATGCACATTT GCCTATGCCG
CGCATGACCA ACACCTATAT GTTGGGTGGG CAACATGAGC CAGAAGCAAT TATTGCCAGC
ATCAAGAATG GAATTTATGC ACCCAACTTT GGTGGTGGTC AAGTAGACAT TACTTCAGGA
AAGTTTGTGT TCTCTACCTC AGAAGCGTAT CTCATTGAGA ATGGTAAGGT CACTAAGCCG
ATTAAGGGCG CTACACTGAT CGGCAACGGC CCAGAAGCCA TGCAAAAGGT TTCTATGGTG
GGTAACGATT TAGCGCTAGA TAAAGGCGTT GGCGTGTGTG GAAAAGATGG CCAGAGCGTG
CCAGTGGGGG TTGGCCAGCC TACACTTAAA GTGGATGAAC TAACCGTAGG CGGTACAGCC
TAG
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| Protein sequence | MSNLVEQNLL TAANLDRDHL ANALDAIYQH DNDFADLYFQ ASQHETWVLE DGIIKDGSYN
VERGVGVRAV SGEKTGFAYS DDINPEALMQ AAKASRNIAS AGGKHKVTGL KNSKVDPKYH
ADNPILGMQD EEKIALLRAV DNYIRQQESA LSQVVVSISG VYEEVLIAAT DGTFCTDIRP
LVRLNCSVLM EKDARRERGS SGAGGRYAYE YFLSQADGRP LYEQIADEAI HMARVNMRAV
AAPAGQMPVV LGSGWPGVLL HEAVGHGLEG DFNRKGASTF SGRMGEQVAS AGCTIVDDGT
LANRRGSLSV DDEGTPSQYN VLIKDGILTG YMQDKLNARL MGVKPTGNGR RESYAHLPMP
RMTNTYMLGG QHEPEAIIAS IKNGIYAPNF GGGQVDITSG KFVFSTSEAY LIENGKVTKP
IKGATLIGNG PEAMQKVSMV GNDLALDKGV GVCGKDGQSV PVGVGQPTLK VDELTVGGTA
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