| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0177 |
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| Symbol | |
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| ID | 4174041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 208160 |
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| End bp | 208720 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053176 |
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| Product | prepilin-type cleavage/methylation |
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| Protein accession | YP_659763 |
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| Protein GI | 109896508 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAGCA GCAAACAACA GGGTGGTTTT ACTCTAATAG AATTAATTAT TGTTATCGTT
ATTTTAGGTA TTTTGGCGGT AACCGCTGCA CCTAAATTTC TCGATATTCA AGGTGACGCT
CGCGCTTCAG TTGTGAGCGG AATGGAAGGT GCAATGAAAT CAGCAAGCGA CATTATTCAC
GCTAAGTCGT TGCTAAATGG GACTAATTCA TCCGCCGCGG CGACAATTAC ACTTGCGAAT
ACTCAAACAA TTCAGACTGA CTACGGTTAT GCACGGCATG ACTGGGAAGA TGCGTGGGAT
GAAATGTTGG ATGCCACCGT TACTGTTCGC ACGAGTGGCT CATGCGTGAC CGAGTTTTGC
GTTGATGAGT CACAGGATAT AGGCACTGAT CTTACTGCCG ATGGTTTCGC TACGCTACCG
AATCAAAGTA CTGTCGCTTT GATTGTTTAT CCCAATGGAA CAACTAACGC GGGTGCCTGT
TATGCTTATT ATATTCATGA TGAAGCAGCA ACAGCCGAGG GGGCTGAGCC TGTTATCGGA
AGCATTACCA CCGGTTGTTA A
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| Protein sequence | MQSSKQQGGF TLIELIIVIV ILGILAVTAA PKFLDIQGDA RASVVSGMEG AMKSASDIIH
AKSLLNGTNS SAAATITLAN TQTIQTDYGY ARHDWEDAWD EMLDATVTVR TSGSCVTEFC
VDESQDIGTD LTADGFATLP NQSTVALIVY PNGTTNAGAC YAYYIHDEAA TAEGAEPVIG
SITTGC
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